Sequence 1: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_003655.3 | Gene: | AP3B1 / 8546 | HGNCID: | 566 | Length: | 1094 | Species: | Homo sapiens |
Alignment Length: | 1177 | Identity: | 581/1177 - (49%) |
---|---|---|---|
Similarity: | 771/1177 - (65%) | Gaps: | 115/1177 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ASNPFAMSTYVERPQMGLDVEFGAD------PASGAAFFQSDGRKHDDLKQMLDSNKDGLKLEAM 64
Fly 65 KRIIGMIARGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPN 129
Fly 130 QLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIPKLYSLDADQKDELVMVIE 194
Fly 195 KLLSDRTTLVVGSAVMAFDEVCPERVDLIHKNYRKLCNFLLDVDEWGQVIIINMLTRYARTQFVD 259
Fly 260 PNADDEDLVNDGLGETPVSERFYDESSHSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSPS 324
Fly 325 NSYHIDVDHRLLLRQTKPLLQSRNASVVMAVAQLYHHVAPKNEVQLIAKALIRLLRSHKEVQSVV 389
Fly 390 LNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILREFQTYISSSDR 454
Fly 455 SFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQM 519
Fly 520 AKLIDYINVPAARAAIIWLIGEYNEKVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNP 584
Fly 585 EQTSLLCQYVFTLARYDPNYDVRDRARFLRQIIFPASGTSSVLSQHARQVFLASKPAPVPESKYR 649
Fly 650 DGNNFQLGSLSHYLNMPAAGYKELPAFPVIPPDSSVRNIAGFMQDKLPGEDSPSGHSKDKSGREG 714
Fly 715 GKEKGAGGEKGFLSE-------SDDKSSAYSESGSSSG-SGTSDSESDSDGSGSSDEEEEEVQKQ 771
Fly 772 QPTKVSSVKERLIDAGSNELAATSSPVKATINNNNNARGSSGTSDSE---------DSSAYSGSS 827
Fly 828 SDDSASGSDNEVK-KNETKTDTGTKPEKLKEKHEKQPEQTAVKSNLDLLLDLDDIPPIG-PVMTP 890
Fly 891 SLGGFLTPG-TPMMAGQAAPLQPQHARNRVELVGPSHIEFKHKELLNKVSGHGLHLAYRFTRSPH 954
Fly 955 LYSSSMCSIELQFQNRGEKEITAIRLGQTTLPAGMQLNEFAPITVLQPQQTASGVLGVDFNDSTH 1019
Fly 1020 AVDLELLSSAGSSRLQLKPPVGELVRSVQIGESCHREERAKLRGMNEHQCELRGLRQDLIDVVAL 1084
Fly 1085 RQKVFESINVAHTHSSSSGQ--LHCFAGQTLSSKSLVLLTLDWKTEDALTLLVNCEKMVIGSMVL 1147
Fly 1148 NELRNAL 1154 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 386/580 (67%) |
HEAT repeat | 48..73 | CDD:293787 | 19/24 (79%) | ||
HEAT repeat | 117..144 | CDD:293787 | 26/26 (100%) | ||
Cnd1 | 129..>252 | CDD:289487 | 94/122 (77%) | ||
HEAT repeat | 147..179 | CDD:293787 | 23/31 (74%) | ||
HEAT repeat | 188..214 | CDD:293787 | 17/25 (68%) | ||
AP3B1_C | 881..1019 | CDD:291462 | 41/139 (29%) | ||
AP3B1 | NP_003655.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | 8/31 (26%) | |
Adaptin_N | 46..581 | CDD:279882 | 381/569 (67%) | ||
HEAT repeat | 116..144 | CDD:293787 | 27/27 (100%) | ||
Cnd1 | 128..>251 | CDD:289487 | 94/122 (77%) | ||
HEAT repeat | 150..180 | CDD:293787 | 22/29 (76%) | ||
HEAT repeat | 188..213 | CDD:293787 | 17/24 (71%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 268..292 | 9/58 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 662..811 | 50/178 (28%) | |||
SEEEED | <729..>764 | CDD:291463 | 8/36 (22%) | ||
AP3B1_C | 814..958 | CDD:291462 | 48/154 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165143298 | |
Domainoid | 1 | 1.000 | 760 | 1.000 | Domainoid score | I86 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H68125 | |
Inparanoid | 1 | 1.050 | 1002 | 1.000 | Inparanoid score | I295 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG54550 | |
OrthoDB | 1 | 1.010 | - | - | D147356at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002006 | |
OrthoInspector | 1 | 1.000 | - | - | otm41413 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101595 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2031 |
SonicParanoid | 1 | 1.000 | - | - | X1748 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.940 |