Protein Alignment rb and AT5G11490

DIOPT Version :10

• Sequence 1: NP_525071.2
• Gene: rb / 31381
• FlyBaseID: FBgn0003210
• Length: 1160
• Species: Drosophila melanogaster
• Sequence 2: NP_001190290.1
• Gene: AT5G11490 / 831021
• AraportID: AT5G11490
• Length: 850
• Species: Arabidopsis thaliana
• Alignment Length: 917
• Identity: 211/917 - (23%)
• Similarity: 372/917 - (40%)
• Gaps: 194/917 - (21%)

  Fly    29 ADPASGAAF---FQSDGRKH-DDLK----QMLDSNKDGL---KLEAMKRIIGMIARGRDASDLFP 82
            |.||:...:   .|..|:.. .|||    |:..|...|:   |.:..|::|..:..|.|.|.:|.
plant     2 APPAASQRYPSPSQPSGKSEVSDLKTQLRQLAGSRAPGVDDSKRDLYKKVISYMTIGIDVSSVFG 66

  Fly    83 AVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVSM 147
            .:|....:.:|.:||:.|:|:..||:...||:||:|:..||..||.:.:||..|||.|.|:||..
plant    67 EMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDPMIRGLALRSLCSLRVPN 131

  Fly   148 IVPIVMLAIRDSAADLSPYVRKTAAHAIPKLY------SLDADQKDELVMVIEKLLSDRTTLVVG 206
            :|..::..:.....|.:.|||..|...:.|||      .:|||....|..:   :|.|....||.
plant   132 LVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLKSL---MLHDSDAQVVA 193

  Fly   207 SAVMAFDEV-----------CPERVDLIHKN--YRKLCNFLLDVDEWGQVIIINMLTRYARTQFV 258
            :.:.|..|:           |.|:..|:.|.  |..| |.:.:.:||.|.:|:.:..:|..:
plant   194 NCLSALQEIWSLEASHSEEACREKESLLSKPVIYYFL-NRIKEFNEWAQCLILELAVKYVPS--- 254

  Fly   259 DPNADDEDLVNDGLGETPVSERFYDESSHSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSP 323
            |.| |..|::|          ...|...|:                          ||:
plant   255 DSN-DIFDIMN----------LLEDRLQHA--------------------------NGA------ 276

  Fly   324 SNSYHIDVDHRLLLRQTKPLLQSRNASVVMAVAQLYHHVAPKNEVQLIAKALIRLLRSHKEVQS- 387
                       ::|...|..||     :.:::..::..|     .:.|...|:.|:.|....||
plant   277 -----------VVLATVKVFLQ-----LTLSMTDVHQQV-----YERIKSPLLTLVSSGSPEQSY 320

  Fly   388 VVLNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILREFQTYISSS 452
            .:|:.:..:..:...||....|.|:.:.::|:::|.|||::||.:|:..:...|:.|...|.::.
plant   321 AILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANV 385

  Fly   453 DRSFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIIT 517
            |.:....:|:|:|:.|....:| ...:..|:..|....::|.||::|::|.||:.......:.|:
plant   386 DIAIARESIRAVGKIALQQYDV-NAIVDRLLQFLEMEKDYVTAETLVLVKDLLRKYPQWSHDCIS 449

  Fly   518 QMAKLID-YINVPAARAAIIWLIGEYNEKVPLIAPDVLRKMAKSFVDEQDV-VKLQVLNLGVKLY 580
            .:..:.. .|..|.|:||:||::|||.:.:. .||.||..:.:::.:|... |:|.:|...:|.:
plant   450 VVGGISSKNIQEPKAKAALIWMLGEYAQDMS-DAPYVLENLIENWEEEHSAEVRLHLLTAAMKCF 513

  Fly   581 LTNPEQTSLLCQYVFTLARYDPNYDVRDRARFLRQII-FPASGTSSVLS--QHARQVFLASKPAP 642
            .....:|.............|.:.||.|||.|..::: :.......|:|  :.|..||     |.
plant   514 FKRAPETQKALGTALAAGIADFHQDVHDRALFYYRVLQYDVHVAERVVSPPKQAVSVF-----AD 573

  Fly   643 VPESKYRDGNNFQLGSLSHYLNMPAAGY------------KELPAFPVIPPDSSVRNIAGFMQDK 695
            ...|:.:|....:..|||.....|:..:            .|:....:.|..||         |.
plant   574 TQSSEIKDRVFDEFNSLSVIYQKPSYMFTDKEHRGPFEFSDEVGNISITPEASS---------DI 629

  Fly   696 LPGEDSPSGHSKDKSGREGGKEKGAGGEKGFLSESDDKSSAYS----ESGSS----------SGS 746
            :|.:..   .:.||....|..||..  .||.   |::..|||:    ||.|:          ||.
plant   630 VPAQQY---EANDKDLLLGIDEKDE--NKGV---SNNNGSAYTAPSLESSSNITSQMQELAISGP 686

  Fly   747 GTSDSESDSDG-------------------------SGSSDEEEEEVQKQQPTKVSSVKERLID- 785
            .||.:...|.|                         :.::.:.....||.:...:|..:|..::
plant   687 ATSATTPQSFGFDDLFGLGLSTAPAPTPSPPLLKLNARAALDPGAFQQKWRQLPISLTQECSVNP 751

  Fly   786 AGSNELAATSSPVKATINNNNNARGSSGTS-----------DSEDSSAYSGSSSDDSASGSDNEV 839
            .|...|....|.:|...:::.:...|.|.|           :||.|:..:....:.|::.:..:|
plant   752 QGIAALTVPQSLIKHMQSHSIHCIASGGQSPNFKFFFFAQKESEPSNYLTECIINTSSAKAQIKV 816

  Fly   840 KKNETKT 846
            |.:|..|
plant   817 KADEQST 823

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rb	NP_525071.2	Adaptin_N	40..621	CDD:396262	150/611 (25%)
		HEAT repeat	48..73	CDD:293787	8/31 (26%)
		HEAT repeat	117..144	CDD:293787	12/26 (46%)
		HEAT repeat	147..179	CDD:293787	7/31 (23%)
		HEAT repeat	188..214	CDD:293787	6/25 (24%)
		AP3B1_C	881..1019	CDD:464319
AT5G11490	NP_001190290.1	Adaptin_N	41..551	CDD:396262	143/582 (25%)
		HEAT repeat	101..129	CDD:293787	12/27 (44%)
		HEAT repeat	135..165	CDD:293787	8/29 (28%)
		HEAT repeat	174..201	CDD:293787	7/29 (24%)
		B2-adapt-app_C	727..836	CDD:198088	19/97 (20%)