Sequence 1: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523400.1 | Gene: | betaCOP / 32820 | FlyBaseID: | FBgn0008635 | Length: | 964 | Species: | Drosophila melanogaster |
Alignment Length: | 875 | Identity: | 164/875 - (18%) |
---|---|---|---|
Similarity: | 306/875 - (34%) | Gaps: | 253/875 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVVS-KNIEVKKLVYVYLVRYAEEQQ 111
Fly 112 DLALLS-----ISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTA 171
Fly 172 AHAIPKLYSLDADQKDELVMVIEKLLSDRTTLVVGSAVMAFDEVCPER--VDLIHKNYRKLCNFL 234
Fly 235 L----DVDEWG---QVIIINMLTRYA------RTQFVDPNADDEDLVNDGLGETPVSERFYDESS 286
Fly 287 HSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSPSNSYHIDVDHRLLLRQTKPLLQSRNASV 351
Fly 352 VMAVAQLYHHVAPK---NEVQLIAKALIRLLRSHKEVQSV-------VLNCIAS--MSTKRKAIF 404
Fly 405 EPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILRE--FQTY-ISSSD----RSFVAATIQ 462
Fly 463 AIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQMAKLIDYIN 527
Fly 528 VPAARAAIIWLIGEYNE----------------KVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLG 576
Fly 577 VKLYLTNPEQTSLLCQYVFTLARYDPNYDVRDRARFLRQIIFPASGTSS--VLSQHARQVFLASK 639
Fly 640 PAPVPESKYR--------DGNNFQLGSLSHYLNMPAAGYKELP---------AFPVIPPDSSVRN 687
Fly 688 I--AGFMQDKLPGEDSPSGHSKDKSGREGGKEKGAGGEKGF-----LSE-SDDKSSAYSESGSSS 744
Fly 745 GSGTSDSESDSDGSGSSDEEEEEVQKQQPT-----------KVSSVKERLIDAGSNELAATS--- 795
Fly 796 --SPVKATINNNNNARGSSGTSDSEDSSAY 823 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 114/628 (18%) |
HEAT repeat | 48..73 | CDD:293787 | 8/24 (33%) | ||
HEAT repeat | 117..144 | CDD:293787 | 8/31 (26%) | ||
Cnd1 | 129..>252 | CDD:289487 | 30/131 (23%) | ||
HEAT repeat | 147..179 | CDD:293787 | 10/31 (32%) | ||
HEAT repeat | 188..214 | CDD:293787 | 3/25 (12%) | ||
AP3B1_C | 881..1019 | CDD:291462 | |||
betaCOP | NP_523400.1 | Adaptin_N | 17..562 | CDD:279882 | 125/669 (19%) |
Coatamer_beta_C | 678..820 | CDD:285019 | 13/67 (19%) | ||
Coatomer_b_Cpla | 826..953 | CDD:291472 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |