Sequence 1: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101002.2 | Gene: | Ap3b2 / 308777 | RGDID: | 1308950 | Length: | 1082 | Species: | Rattus norvegicus |
Alignment Length: | 1157 | Identity: | 601/1157 - (51%) |
---|---|---|---|
Similarity: | 761/1157 - (65%) | Gaps: | 125/1157 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 EFGADPASGAAFFQSDGRKHDDLKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVVS 90
Fly 91 KNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLA 155
Fly 156 IRDSAADLSPYVRKTAAHAIPKLYSLDADQKDELVMVIEKLLSDRTTLVVGSAVMAFDEVCPERV 220
Fly 221 DLIHKNYRKLCNFLLDVDEWGQVIIINMLTRYARTQFVDPNADDEDLVNDGLGETPVSERFYDES 285
Fly 286 SHSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSPSNS-YHIDVDHRLLLRQTKPLLQSRNA 349
Fly 350 SVVMAVAQLYHHVAPKNEVQLIAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVR 414
Fly 415 TSDPTHIKLLKLDILTNLASAGSISLILREFQTYISSSDRSFVAATIQAIGRCASSIKEVTETCL 479
Fly 480 SGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNE 544
Fly 545 KVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNPEQTSLLCQYVFTLARYDPNYDVRDR 609
Fly 610 ARFLRQIIFPASGTSSVLSQHARQVFLASKPAPVPESKYRDGNNFQLGSLSHYLNMPAAGYKELP 674
Fly 675 AFPVIPPDSSVRNIAGFMQDKLPGEDSPSGHSKDKSGREGGKEK----GAGGEKGFLSESDDKSS 735
Fly 736 AYSESG----SSSGSGTSDSESDSD------GSGS-SDEEEEEVQKQQPTKVSSVKERLIDAGSN 789
Fly 790 ELAATSSPVKATINNNNNARGSSGTSDSEDSSAYSGSSSDDSASGSDNEVKKNETKTDTGTKPEK 854
Fly 855 LKEKHEKQPEQTAVKSNLDLLLDLDD-----IPPIGP--VMTPSLGGFLTPGTPMMAGQAAP--L 910
Fly 911 QPQHARNRVELVGPSHIEFKHKELLNKVSGHGLHLAYRFTRSPHLYSSSMCSIELQFQNRGEKEI 975
Fly 976 TAIRLGQTTLPAGMQLNEFAPITVLQPQQTASGVLGVDFNDSTHAVDLELLSSAGSSRLQLKPPV 1040
Fly 1041 GELVRSVQIGESCHREERAKLRGMNEHQCELR---GLRQDLIDVVALRQKVFESINVAHTHSSSS 1102
Fly 1103 GQLHCFAGQTLSSKSLVLLTLDWKTEDALTLLVNCEKMVIGSMVLNELRNAL 1154 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 399/581 (69%) |
HEAT repeat | 48..73 | CDD:293787 | 19/24 (79%) | ||
HEAT repeat | 117..144 | CDD:293787 | 25/26 (96%) | ||
Cnd1 | 129..>252 | CDD:289487 | 99/122 (81%) | ||
HEAT repeat | 147..179 | CDD:293787 | 24/31 (77%) | ||
HEAT repeat | 188..214 | CDD:293787 | 18/25 (72%) | ||
AP3B1_C | 881..1019 | CDD:291462 | 44/141 (31%) | ||
Ap3b2 | NP_001101002.2 | Adaptin_N | 34..590 | CDD:366724 | 399/582 (69%) |
HEAT repeat | 111..139 | CDD:293787 | 26/27 (96%) | ||
HEAT repeat | 145..173 | CDD:293787 | 21/27 (78%) | ||
HEAT repeat | 182..208 | CDD:293787 | 18/25 (72%) | ||
AP3B1_C | 804..947 | CDD:373301 | 49/157 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166337029 | |
Domainoid | 1 | 1.000 | 757 | 1.000 | Domainoid score | I86 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1002 | 1.000 | Inparanoid score | I280 |
OMA | 1 | 1.010 | - | - | QHG54550 | |
OrthoDB | 1 | 1.010 | - | - | D147356at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002006 | |
OrthoInspector | 1 | 1.000 | - | - | otm45529 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101595 | |
Panther | 1 | 1.100 | - | - | O | PTHR11134 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1748 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.910 |