Protein Alignment rb and copb-1

DIOPT Version :9

• Sequence 1: NP_001162664.2
• Gene: rb / 31381
• FlyBaseID: FBgn0003210
• Length: 1160
• Species: Drosophila melanogaster
• Sequence 2: NP_494441.1
• Gene: copb-1 / 173656
• WormBaseID: WBGene00021292
• Length: 971
• Species: Caenorhabditis elegans
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rb	NP_001162664.2	Adaptin_N	40..621	CDD:279882
		HEAT repeat	48..73	CDD:293787
		HEAT repeat	117..144	CDD:293787
		Cnd1	129..>252	CDD:289487
		HEAT repeat	147..179	CDD:293787
		HEAT repeat	188..214	CDD:293787
		AP3B1_C	881..1019	CDD:291462
copb-1	NP_494441.1	COG5096	31..935	CDD:227427
		HEAT repeat	138..162	CDD:293787
		HEAT repeat	174..222	CDD:293787
		HEAT repeat	245..275	CDD:293787
		HEAT repeat	284..308	CDD:293787
		HEAT repeat	319..343	CDD:293787
		Coatamer_beta_C	677..816	CDD:285019
		Coatomer_b_Cpla	825..953	CDD:291472

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910