| Sequence 1: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006517586.1 | Gene: | Ap3b1 / 11774 | MGIID: | 1333879 | Length: | 1118 | Species: | Mus musculus |
| Alignment Length: | 1201 | Identity: | 586/1201 - (48%) |
|---|---|---|---|
| Similarity: | 772/1201 - (64%) | Gaps: | 139/1201 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 ASNPFAMSTYVERPQMGLDVEFGAD------PASGAAFFQSDGRKHDDLKQMLDSNKDGLKLEAM 64
Fly 65 KRIIGMIARGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPN 129
Fly 130 QLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIPKLYSLDADQKDELVMVIE 194
Fly 195 KLLSDRTTLVVGSAVMAFDEVCPERVDLIHKNYRKLCNFLLDVDEWGQVIIINMLTRYARTQFVD 259
Fly 260 PNADDEDLVNDGLGETPVSERFYDESSHSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSPS 324
Fly 325 NSYHIDVDHRLLLRQTKPLLQSRNASVVMAVAQLYHHVAPKNEVQLIAKALIRLLRSHKEVQSVV 389
Fly 390 LNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILREFQTYISSSDR 454
Fly 455 SFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQM 519
Fly 520 AKLIDYINVPAARAAIIWLIGEYNEKVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNP 584
Fly 585 EQTSLLCQYVFTLARYDPNYDVRDRARFLRQIIFPASGTSSVLSQHARQVFLASKPAPVPESKYR 649
Fly 650 DGNNFQLGSLSHYLNMPAAGYKELPAFPVIPPDSSVRNIAGFMQDKLPGEDSPSGHSKDKSGREG 714
Fly 715 GKEKGAGGEKGFLSESDDK-----------------------SSAYSESGSSSGSGTSDSESDSD 756
Fly 757 GSGSSDEEE----EEVQKQQPTKVSSVKERLIDAGSNELAATSSPVKATINNNNNARGSSGTSDS 817
Fly 818 EDSSAYSGSSSD-DSASGSDNEVKKNETKTDTGTKPEKLKEKHEKQPEQTAVKSNLDL-LLDLDD 880
Fly 881 IPPIG-PVMTPSLGGFLTPG-TPMMAGQAAPLQPQHARNRVELVGPSHIEFKHKELLNKVSGHGL 943
Fly 944 HLAYRFTRSPHLYSSSMCSIELQFQNRGEKEITAIRLGQTTLPAGMQLNEFAPITVLQPQQTASG 1008
Fly 1009 VLGVDFNDSTHAVDLELLSSAGSSRLQLKPPVGELVRSVQIGESCHREERA-------------K 1060
Fly 1061 LRGMNEHQCELRGLRQDLIDVVALRQKVFESINVAHTHS--SSSGQLHCFAGQTLSSKSLVLLTL 1123
Fly 1124 DWKTEDALTLLVNCEKMVIGSMVLNELRNAL 1154 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 384/580 (66%) |
| HEAT repeat | 48..73 | CDD:293787 | 19/24 (79%) | ||
| HEAT repeat | 117..144 | CDD:293787 | 26/26 (100%) | ||
| Cnd1 | 129..>252 | CDD:289487 | 92/122 (75%) | ||
| HEAT repeat | 147..179 | CDD:293787 | 22/31 (71%) | ||
| HEAT repeat | 188..214 | CDD:293787 | 17/25 (68%) | ||
| AP3B1_C | 881..1019 | CDD:291462 | 42/139 (30%) | ||
| Ap3b1 | XP_006517586.1 | Adaptin_N | 46..582 | CDD:366724 | 379/569 (67%) |
| HEAT repeat | 116..144 | CDD:293787 | 27/27 (100%) | ||
| HEAT repeat | 150..180 | CDD:293787 | 21/29 (72%) | ||
| HEAT repeat | 188..213 | CDD:293787 | 17/24 (71%) | ||
| SEEEED | <734..812 | CDD:373302 | 26/102 (25%) | ||
| AP3B1_C | 824..969 | CDD:373301 | 49/150 (33%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167833471 | |
| Domainoid | 1 | 1.000 | 757 | 1.000 | Domainoid score | I87 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H68125 | |
| Inparanoid | 1 | 1.050 | 1003 | 1.000 | Inparanoid score | I293 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG54550 | |
| OrthoDB | 1 | 1.010 | - | - | D147356at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002006 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43466 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101595 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11134 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2031 |
| SonicParanoid | 1 | 1.000 | - | - | X1748 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 15 | 14.940 | |||||