Sequence 1: | NP_001162664.2 | Gene: | rb / 31381 | FlyBaseID: | FBgn0003210 | Length: | 1160 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001229972.1 | Gene: | Ap1b1 / 11764 | MGIID: | 1096368 | Length: | 953 | Species: | Mus musculus |
Alignment Length: | 1030 | Identity: | 269/1030 - (26%) |
---|---|---|---|
Similarity: | 431/1030 - (41%) | Gaps: | 272/1030 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 DLKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQ 111
Fly 112 DLALLSISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIP 176
Fly 177 KLYSLDADQKDE--LVMVIEKLLSDRTTLVVGSAVMAFDEVCPER-----VDLIHKNYRKLCNFL 234
Fly 235 LDVDEWGQVIIINMLTRYARTQFVDPNADDEDLVNDGLGETPVSERFYDESSHSSSHSDDGSSDD 299
Fly 300 EKNKSSTNNKNNGGGNGSRTPSSPSNSYHIDVDHRLLLRQTKPLLQSRNASVVMAVAQL------ 358
Fly 359 -------YHHVAPKNEVQLIAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVRTS 416
Fly 417 DPTHIKLLKLDILTNLASAGSISLILREFQTYISSSDRSFVAATIQAIGRCASSIKEVTETCLSG 481
Fly 482 LVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNEKV 546
Fly 547 PLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNPEQTSLLCQYVFTLARYD-PNYDVRDRA 610
Fly 611 RFLRQIIFPASGTSSVLSQHARQVFLASKPAPVPESKYRDGNNFQLGSLSHYLNMPAAGYKELPA 675
Fly 676 FPVIPPDSSVRNIAGFMQDKLPGEDSPSGHSKDKSGREGGKEKGAGGEKGFLSESDDKSSAYSES 740
Fly 741 GSSSGSGTSDSESDSDGSGSSDEEEEEVQKQQPTKVSSVKERL-----IDAG----SNELAATSS 796
Fly 797 PVKATINNNNNARGSSGTSDSEDSSAYSGSSSDDSASGSDNEVKKNETKTDTGTKPEKLKEKHEK 861
Fly 862 QPEQTAVKSNLDLLLDLDDIPPIGPVMTPSLGGFLTPGTPMMAGQAAPLQPQHARNRVELVGPSH 926
Fly 927 IEFKHKELLNKVSGHGLHLAYRFTRSPHLYSSSMCSIELQFQNRGEKEIT--AIRLGQTTL---P 986
Fly 987 AGMQLNEFAPITV---LQPQQTASGVLGVDFNDSTHAVDLELLSSAGSSRLQLKP 1038 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rb | NP_001162664.2 | Adaptin_N | 40..621 | CDD:279882 | 182/594 (31%) |
HEAT repeat | 48..73 | CDD:293787 | 10/24 (42%) | ||
HEAT repeat | 117..144 | CDD:293787 | 11/26 (42%) | ||
Cnd1 | 129..>252 | CDD:289487 | 44/129 (34%) | ||
HEAT repeat | 147..179 | CDD:293787 | 12/31 (39%) | ||
HEAT repeat | 188..214 | CDD:293787 | 8/27 (30%) | ||
AP3B1_C | 881..1019 | CDD:291462 | 28/145 (19%) | ||
Ap1b1 | NP_001229972.1 | Adaptin_N | 11..534 | CDD:366724 | 183/598 (31%) |
HEAT repeat | 51..75 | CDD:293787 | 13/23 (57%) | ||
HEAT repeat | 87..114 | CDD:293787 | 11/26 (42%) | ||
HEAT repeat | 121..151 | CDD:293787 | 12/29 (41%) | ||
HEAT repeat | 160..186 | CDD:293787 | 8/25 (32%) | ||
HEAT repeat | 197..228 | CDD:293787 | 11/30 (37%) | ||
HEAT repeat | 355..379 | CDD:293787 | 8/23 (35%) | ||
HEAT repeat | 391..419 | CDD:293787 | 11/27 (41%) | ||
HEAT repeat | 427..458 | CDD:293787 | 12/30 (40%) | ||
HEAT repeat | 464..490 | CDD:293787 | 8/25 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 584..621 | 14/60 (23%) | |||
Alpha_adaptinC2 | 730..830 | CDD:197886 | 26/110 (24%) | ||
B2-adapt-app_C | 839..952 | CDD:198088 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D323029at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |