DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3556 and tcnbb

DIOPT Version :9

Sequence 1:NP_001245529.1 Gene:CG3556 / 31380 FlyBaseID:FBgn0029708 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001239578.1 Gene:tcnbb / 566658 ZFINID:ZDB-GENE-030131-12 Length:143 Species:Danio rerio


Alignment Length:92 Identity:15/92 - (16%)
Similarity:36/92 - (39%) Gaps:30/92 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   461 PKLAVPFGLSSSAEESDAKNISYTYTLWVGSNVTESFSLSLV-------SPKNTSFFKAMTQ--- 515
            ||....||:.:..::|:..|.:|        ::::|:.:.|.       |.:|.::::.:::   
Zfish    59 PKGMPIFGVLNQLQDSNQLNFTY--------SISKSYGIFLESVNGLAGSTENKTYWELLSKRER 115

  Fly   516 ------------AAEMDPRFIFEAREW 530
                        ..|.:..||.....|
Zfish   116 KTTRLNVGIGCYQPERNENFIMNFTTW 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3556NP_001245529.1 ISOPREN_C2_like 165..411 CDD:298658
tcnbbNP_001239578.1 DUF4430 67..141 CDD:291166 10/81 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594433
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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