DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3556 and tcn2

DIOPT Version :9

Sequence 1:NP_001245529.1 Gene:CG3556 / 31380 FlyBaseID:FBgn0029708 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001184035.1 Gene:tcn2 / 496768 XenbaseID:XB-GENE-970701 Length:431 Species:Xenopus tropicalis


Alignment Length:429 Identity:86/429 - (20%)
Similarity:162/429 - (37%) Gaps:80/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 ILAKELSGGRDPNDSV-------DGHVQVIQELEDTLSVKEMEIEILAMLDRHHTLPKPLDLDKL 250
            :|...:....:||.|:       :.|  .::...|.|...:..:|.:......:...:| ....|
 Frog    39 LLRSTIDNSGEPNPSIYIGLRLSEDH--SLEREADYLKKLKSSLETITASSNTNNQEQP-STGIL 100

  Fly   251 ARYVLALGSLCKDPKHFHGHDLVATLQH--HEPAQDI-----------EFALTTLSACSSAAHVR 302
            |.|::||.|.|:|.:......|:..|:|  |:..:.|           :::|..::.|.....|.
 Frog   101 ALYLMALKSSCEDMEKPERMRLITRLKHQLHKEKKHIVEKDHPLTNYFQYSLGLVALCIHDKKVD 165

  Fly   303 KRQIRRLLDI------ASGVTDQSVDAIAMVILALRCIVTDHRH-----RHLQHFVRRPARGLAT 356
            :..|::|:::      ..|.| .|||..||..||..|:.....:     ..:...:....:.:..
 Frog   166 EHVIQKLINVEKKDGFVHGDT-LSVDTEAMAGLAFLCLKLSGLYSPALTADINLAIDNVKQKIIK 229

  Fly   357 LQDQRGSFGSLRSTALAMQALQDLEYDPAGHWNRTAASRYILSRQRADGGWSEEPLQDGQEPDIG 421
            .::..|.||::.||.||:|.|..|...........|.|..:.:.::   |....|:         
 Frog   230 SKNAEGVFGNIYSTPLAVQFLSALGTSKDNEECPKAISALLEAMKQ---GKFSNPM--------- 282

  Fly   422 VGLTADIILALGWKGLGAVRALQC----DHVIRESSDPTENGEPKLAVPFGLSSSAEESDAKNIS 482
              :.:.::..|..|....|..::|    |:::.         .|...|   |....|..:..|:.
 Frog   283 --MMSQLMPVLHQKSYLDVANIKCTGNKDNLVL---------NPSTGV---LPDVVEGEERINVI 333

  Fly   483 YTYTLWVGSNVTESFSLSLVSPKNTSFFKAMTQAAEMDPRFIFEAREWPNGHYVHTLYGKKEEPR 547
            .|    |.|...:...:.:.:|..:|....:..|.:.:..|:|:.::...|.::.|:.|......
 Frog   334 IT----VESPSNQPVRVGVEAPVRSSLLDILKLAEKQNENFMFKTKDSLYGPFLVTVNGVTGSSE 394

  Fly   548 GYHYWLLYRLPELPDPNNTPGNQLIAPVGVDELMVEDGE 586
            ...||.|     |.|||    :.||.  |:.:...||||
 Frog   395 ERTYWQL-----LKDPN----DPLIE--GIADYRPEDGE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3556NP_001245529.1 ISOPREN_C2_like 165..411 CDD:298658 50/248 (20%)
tcn2NP_001184035.1 Cobalamin_bind 6..322 CDD:366477 59/312 (19%)
DUF4430 354..430 CDD:379618 21/80 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1233171at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10559
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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