DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and tbx21

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:694 Identity:198/694 - (28%)
Similarity:270/694 - (38%) Gaps:169/694 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 NNSSSSSSNNSASAAAHPSHH-----------PTAAHHSPSTGAAAPPAGATGLPPPTPPHHLQQ 230
            |.:.:.|....|..::|...|           .|..::..|.     |.|...|   |.|.|.:.
Zfish    14 NGTDAQSFAKDAELSSHLHRHRDLSDFKMGIQDTRFYYQDSI-----PNGQESL---TLPFHAEH 70

  Fly   231 QQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPHAHHLGSAYTTA- 294
            .|.                     ||:..|......|.|...|.......|.:......||::| 
Zfish    71 HQS---------------------AGAQTGRFYAPAPLGSCHFTSRSGTGHTYVPAGADAYSSAN 114

  Fly   295 -EDVVLASAVAHQL-------HPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVIT 351
             :||..:||..:..       ...|..|..||     |....:|.|....||.||||..|||:||
Zfish   115 GKDVYPSSADGYTASFQHGFPRAPMYSLPGLQ-----VSGKTQVLLNNYPLWAKFHKYQTEMIIT 174

  Fly   352 KSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMP-KRMYIHPDS 415
            |.||:|||.:.|.::.||..|.|.:.:|:|.||.:.:::...:|:..|||:..|| .|||:||||
Zfish   175 KQGRRMFPFLSFNITSLDPSAHYNIYVDVVLADQHHWRYQGGKWVQCGKAEGNMPGNRMYMHPDS 239

  Fly   416 PTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRA-NDILKLPYSTFR-- 477
            |.||..||::.|||.|||||||....:......:|.|:||||||.|:|.. .|..:.|:.|.:  
Zfish   240 PNTGTHWMRQEVSFGKLKLTNNKGSSNNVAQMIVLQSLHKYQPRLHIVEVKEDGTEDPFLTSKTQ 304

  Fly   478 TYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVS 542
            |:||.||:|||||||||..|||||||:|||||||||       ....|.:  ..|.|:|.|:...
Zfish   305 TFVFPETQFIAVTAYQNADITQLKIDHNPFAKGFRD-------NYDTLYA--PPDPDRLTPSPTE 360

  Fly   543 SSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGP-PQSPLL---PLSHSLQQMHAHQHS 603
            |.:  |..|..      :||...|.:|         .:.| |||...   |:|.: |.......|
Zfish   361 SQQ--LLSGSC------YPHQPYLSDQ---------YMSPLPQSRFYSREPVSMT-QPCPKDPTS 407

  Fly   604 AALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGST---- 664
            :..:.|:                              |.:...|..:..|.|..|:...|.    
Zfish   408 SPHSRWY------------------------------LSSQQAVPPNRLDFSAYETEYTSNSLYK 442

  Fly   665 -----GGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGL 724
                 .....|.|..|.......|.::|    |||..:...         .|||..|.  :||..
Zfish   443 PFPLQSSPHHPLSYYSENPFTSGAVSSA----NPGAWTASG---------RPSPQYLN--HPHHS 492

  Fly   725 YPPPHLGLLHN-PAAAAAMSPAGLNPGLLFNAQLALAAQHPALFGHAYAAAGHTPV--------- 779
            .|...|..... |:.||:.||...|.....:..|....:.|.|...:..:...|.:         
Zfish   493 KPTSSLSWFRAVPSPAASSSPTATNSRFHASPSLLEPQRQPLLQDKSKESTEDTWIEAPSVKSVD 557

  Fly   780 SPLQGL------KSHRFSPYSLPGSLGSAFDAVTPGSNANRSGD 817
            |...||      |..|.|||:          :.|..|..|||.:
Zfish   558 SADSGLFEGGESKKRRVSPYT----------SSTENSPPNRSAE 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 14/66 (21%)
T-box 330..513 CDD:279278 97/186 (52%)
tbx21NP_001164070.1 TBOX 150..343 CDD:238106 99/199 (50%)
T-box_assoc 363..608 CDD:292794 60/302 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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