DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and Tbx18

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_076303.3 Gene:Tbx18 / 76365 MGIID:1923615 Length:613 Species:Mus musculus


Alignment Length:672 Identity:203/672 - (30%)
Similarity:285/672 - (42%) Gaps:183/672 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 SNNSASAAAHPSHHPTAAHHSPSTGAAAPPA----------GATGLPPPTPPHHLQQQQQQQQHP 238
            |.....|||.|          |:.|||:.||          |:.|.........||         
Mouse    67 SEADEEAAAPP----------PAAGAASGPARSCADAERSCGSRGAAGSCEDGFLQ--------- 112

  Fly   239 APPPPPYFPAAALAALAGSPAG-PHPGLYPGGGLRFPPHHPGAHPHAHHLGSAYTTAEDVVLASA 302
                    .|:.||:..|||.| |.|||          ..||.                      
Mouse   113 --------GASPLASPGGSPKGSPVPGL----------ARPGT---------------------- 137

  Fly   303 VAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSG 367
                      ||.|.|.        |:|.|:|.:||::||::||||:|||:||:|||.|:.::||
Mouse   138 ----------PLPAPQA--------PRVDLQGAELWKRFHEIGTEMIITKAGRRMFPAMRVKISG 184

  Fly   368 LDAKAKYILLLDIVAADD--YRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFH 430
            ||...:|.:.:|||..|:  |||.:|:|:|||||.||..:|.|:|||||||.:||.||::|:||.
Mouse   185 LDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFD 249

  Fly   431 KLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVR------ANDILKLPYST-FRTYVFKETEFIA 488
            |||||||..|..|.:   ||:||||||||.|::|      .:.|..:|... .:.:.|.||.|..
Mouse   250 KLKLTNNELDDQGHI---ILHSMHKYQPRVHVIRKDCGDDLSPIKPVPSGEGVKAFSFPETVFTT 311

  Fly   489 VTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLN----------PTHVSS 543
            ||||||::||:||||.|||||||||:|. .|...:||:.:.......|.          |...::
Mouse   312 VTAYQNQQITRLKIDRNPFAKGFRDSGR-NRMGLEALVESYAFWRPSLRTLTFEDIPGIPKQGNT 375

  Fly   544 SRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQS---PLLPLSHSL---QQMHAHQH 602
            |.:.|..|.....|..|||  ||..........  .:||..|   .|.|..:|.   ..:..:::
Mouse   376 SSSALLQGTGNAVPATHPH--LLSGSSCSSPAF--HLGPNTSQLCSLAPADYSACARSGLALNRY 436

  Fly   603 SAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGA 667
            |.:||..::.|               .|.|:|.....|..:...|   .|:.|.:.|:||:.|..
Mouse   437 STSLAETYSRL---------------TNQSSETFAPPRTPSYVSV---SSNPSVNMSMGGTDGDT 483

  Fly   668 FRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGL 732
            |....|....:..|.:........:|.|.::.:..      .|.|.:              :...
Mouse   484 FSCPQTSLSMQISGMSPQLQYIMPSPSGNAFAANQ------THQSSY--------------NTFR 528

  Fly   733 LHNPAAAAAMSPAGLNPGLLFNAQLALAAQHPALFGHAYAAAGHTP---------VSPLQGLKSH 788
            ||:|.|..         |..|:....|||....:.....:..|.:|         :.|::|:  |
Mouse   529 LHSPCALY---------GYNFSTSPKLAASPEKIVSSQGSFLGSSPSGTMTDRQMLPPVEGV--H 582

  Fly   789 RFSPYSLPGSLGSAFDAVTPGS 810
            ..|    .|...|.||:.|.||
Mouse   583 LLS----SGGQQSFFDSRTLGS 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 10/58 (17%)
T-box 330..513 CDD:279278 103/191 (54%)
Tbx18NP_076303.3 Engrailed homology 1 repressor. /evidence=ECO:0000305|PubMed:17584735 18..28
Nuclear localization signal. /evidence=ECO:0000305|PubMed:17584735 36..40
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..94 11/36 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..145 17/80 (21%)
TBOX 145..340 CDD:238106 107/198 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.