DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and tbx20

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001030292.1 Gene:tbx20 / 619590 XenbaseID:XB-GENE-487334 Length:440 Species:Xenopus tropicalis


Alignment Length:424 Identity:154/424 - (36%)
Similarity:223/424 - (52%) Gaps:92/424 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 TLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADD--YRYKFHNS 393
            :||.|:||:|||.|||||:||||||:|||.::...||:||.||||:|:|||..|:  |||.:|.|
 Frog    97 SLETKELWDKFHDLGTEMIITKSGRRMFPTIRVSFSGVDADAKYIVLMDIVPVDNKRYRYAYHRS 161

  Fly   394 RWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQP 458
            .|:|||||||.:|.|:|:|||||.||||.::::|||.|:|||||..|:||.:   ||||||||||
 Frog   162 SWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHI---ILNSMHKYQP 223

  Fly   459 RFHLVRAND----ILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGA--- 516
            |.|:::..|    :|.|....|||::|:||.|.|||||||:.||:||||:|||||||||:..   
 Frog   224 RVHIIKKKDHTASLLNLKSEEFRTFIFQETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTD 288

  Fly   517 GKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVG 581
            .:||..::|:...            |.:|:|:                   ....|:    ||:|
 Frog   289 IERESVESLIQKH------------SYARSPI-------------------RTYGDE----DVLG 318

  Fly   582 PPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADAD 646
            .....:    .|.........:.:|::|.:  :.:|....:|..:..|..:              
 Frog   319 EDGQTM----QSRGSAFTTSENLSLSSWVS--STSGFSGFQHPQSLTALGT-------------- 363

  Fly   647 VERDGSDSSCSESVGGSTGGAFRPTS-TGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIH 710
                 |.:|.:..:.....|...|.| .|.|     ...:|.|:.:...|.::||.::   |..|
 Frog   364 -----STASLATPIPHPIQGTLPPYSRLGMP-----ITPSALASSMQGSGPTFPSFHM---PRYH 415

  Fly   711 PSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSP 744
                   :.:..|.|.... ||.|   ::|.|:|
 Frog   416 -------HYFQQGPYAAIQ-GLRH---SSAVMTP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 114/187 (61%)
tbx20NP_001030292.1 T-box 96..282 CDD:366363 114/187 (61%)
T-box 98..282 114/186 (61%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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