DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx1

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001030290.1 Gene:tbx1 / 619587 XenbaseID:XB-GENE-478084 Length:463 Species:Xenopus tropicalis


Alignment Length:534 Identity:181/534 - (33%)
Similarity:237/534 - (44%) Gaps:128/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 FPAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHP-----HAHHLGSAYTTAEDVVLASAVAH 305
            |.|.:|::|..| .|.|  |.|..|..:..|.|...|     |::..|.|....|....:|:.|.
 Frog    22 FTANSLSSLNAS-GGYH--LSPSPGDPYSQHEPHYEPCSASQHSYSFGHACPEPESGASSSSCAS 83

  Fly   306 QLHPAMRPLRALQPEDDGVVDDPKVT-----LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRV 365
            .. |......:.......|..:|||.     ||.|.||::|::|||||::||:||:|||..:.::
 Frog    84 ST-PGSGSTGSSGSSKAPVKKNPKVANITVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQVKI 147

  Fly   366 SGLDAKAKYILLLDIVAADD--YRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVS 428
            .|:|..|.|:||:|.|..||  |||.||:|.|:|||||||..|.|::.|||||..|.|||:::||
 Frog   148 FGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGAQWMKQIVS 212

  Fly   429 FHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRAN---DILKLPYSTFRTYVFKETEFIAVT 490
            |.|||||||:.|.:|.:   ||||||:||||||:|..:   |..|.....|:|:||:||.|.|||
 Frog   213 FDKLKLTNNLLDDNGHI---ILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAVT 274

  Fly   491 AYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGR 555
            ||||.:||||||.:|||||||||                 .|.:.....|...|...::.....|
 Frog   275 AYQNHRITQLKIASNPFAKGFRD-----------------CDPEDWPRNHRPGSLPLMNAFARSR 322

  Fly   556 PPHLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGA 620
            .|                     |..|||                          |.....|.|.
 Frog   323 NP---------------------VSSPPQ--------------------------NGSDKDGDGR 340

  Fly   621 SEHAAAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAA 685
            .|:....:......||..::|.:..          .|.|:  ...|...|.|||.|         
 Frog   341 REYERDTSGTPLHGDAAHQQLMSRV----------LSPSL--PVPGGLVPLSTGRP--------- 384

  Fly   686 AAAAGLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGL--------YPPPHL---GLLH---NP 736
                  :|.......|:.....|:|..|:..|..|.|.|        ||.|.:   |..|   ||
 Frog   385 ------SPPHELRLDPHSQGSEPLHHHPYKYPTSYDHYLGAKTRPAPYPLPSIRGHGYHHHPMNP 443

  Fly   737 AAAAAMSPAGLNPG 750
            |||...|.||. ||
 Frog   444 AAANMYSGAGA-PG 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 15/62 (24%)
T-box 330..513 CDD:279278 108/192 (56%)
tbx1NP_001030290.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..58 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..103 4/28 (14%)
T-box 112..297 CDD:366363 107/187 (57%)
T-box 114..297 107/185 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 320..354 10/80 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..405 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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