DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbr1a

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_693121.1 Gene:tbr1a / 564699 ZFINID:ZDB-GENE-060810-93 Length:585 Species:Danio rerio


Alignment Length:480 Identity:145/480 - (30%)
Similarity:208/480 - (43%) Gaps:99/480 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 SPAGTPPPTIVGLPPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAH-HSPSTGAAAPPAGATGLP 220
            |||..|.....|.|.|   ...:::.....|:|.::..:|.|.... .|||..|           
Zfish     9 SPANKPVSLDNGFPHI---IMTAAAGVERVSSSCSSGDAHEPPLKRPRSPSPNA----------- 59

  Fly   221 PPTPPHHLQQQQQQQQHPAPPPP---------PYFPAAALAALAGSPAGPHP----GLYPGGGLR 272
                 ...|...:.:..|....|         .|.....:.||:|....|.|    |||.|....
Zfish    60 -----RETQDNGESENKPESSDPRTDFASEMFSYAGQHVVPALSGHYMSPQPVISSGLYSGMSYS 119

  Fly   273 FPPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDL 337
            :|..:...:.:|    :.|:               .||             |....:|.|..:.|
Zfish   120 YPQPYEQTYANA----AVYS---------------FPA-------------VSGKAQVYLCNRAL 152

  Fly   338 WEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKAD 402
            |.|||:..|||:|||.||:|||.:.|.|||||....|.:.:|::.||...::|...:|:..||||
Zfish   153 WFKFHRHQTEMIITKQGRRMFPCLTFNVSGLDPAGHYNIAVDVILADPNHWRFQGGKWVPCGKAD 217

  Fly   403 PEMP-KRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLV--- 463
            ..:. .|:|.|||||.||..||::.:||.|||||||...........:|.|:||||||.|::   
Zfish   218 TNVTGNRVYTHPDSPNTGAHWMRQEISFGKLKLTNNKGASSNNTQMIVLQSLHKYQPRVHVIEIS 282

  Fly   464 RANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSN 528
            :..|.........:|:.|.||:||:||||||..|||||||:|||||||||    ..:.|.::   
Zfish   283 KNEDEDTSDPDGVQTFTFPETQFISVTAYQNTDITQLKIDHNPFAKGFRD----NYDTKYSM--- 340

  Fly   529 RGSDSDKLNPTH------VSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPL 587
              .::|:|.|:.      :.|||            :..|.|...:...|...|.....|.|:.. 
Zfish   341 --DNTDRLTPSDSPHSQLLPSSR------------YAMPSALFQEQFVDSYTKSCFTTGTPERG- 390

  Fly   588 LPLSHSLQQMHAHQHSAALAA--WF 610
            |..::|:...:..|.|:..:.  ||
Zfish   391 LEFTNSIMTSNQTQESSVTSGQRWF 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 11/61 (18%)
T-box 330..513 CDD:279278 90/186 (48%)
tbr1aXP_693121.1 TBOX 142..335 CDD:238106 92/196 (47%)
T-box_assoc 355..550 CDD:292794 15/74 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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