DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx1

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:667 Identity:188/667 - (28%)
Similarity:259/667 - (38%) Gaps:239/667 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LTQRPTDFSVSSLLTAGSNNNNSGNTNSGNNNSNSNNNTNSNTNN---------TNNLVAVSPTG 88
            |:.:...||::.|::|   .:.:|||....:.::.:.....|.:.         |..:.|:|   
Zfish     7 LSPKANAFSIACLISA---RDQAGNTTFDKHATSLDKQAVQNCSRYIKMHYSTVTREMEAIS--- 65

  Fly    89 GGAQLSPQSNHSSSNTTTTSNTNNSSSNNNNNNSTHNNNNNHTNNNNNNNNNTSQKQGHHLSTTE 153
                 ||.....|......:.|.:|.|:.|...|                        :|||   
Zfish    66 -----SPWLTQLSHFCDVAAFTTSSLSSLNTPGS------------------------YHLS--- 98

  Fly   154 EPPSPAGTPPPTIVGLPPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAAPPAGATG 218
              ||| |.|               .|...|......||.|      |.::|.|..|.||..|.:|
Zfish    99 --PSP-GDP---------------YSHHESQFEPCPAAQH------AYNYSGSNSAQAPAQGDSG 139

  Fly   219 LPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFPPHHPGAHPH 283
                                          .:..:.:.|.:.|:..|                  
Zfish   140 ------------------------------TSNCSSSSSSSTPNKTL------------------ 156

  Fly   284 AHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVT-----LEGKDLWEKFHK 343
                                                    |..:|||.     ||.|.||::|::
Zfish   157 ----------------------------------------VKKNPKVANINVQLEMKALWDEFNQ 181

  Fly   344 LGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADD--YRYKFHNSRWMVAGKADPEMP 406
            |||||::||:||:|||..:.::.|:|..|.|:||:|.:..||  |||.||:|.|:|||||||..|
Zfish   182 LGTEMIVTKAGRRMFPTFQVKIFGMDPMADYMLLMDFLPVDDKRYRYAFHSSSWLVAGKADPATP 246

  Fly   407 KRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRAN---DI 468
            .|::.|||||..|.|||:::|||.|||||||:.|.:|.:   ||||||:||||||:|..:   |.
Zfish   247 GRVHYHPDSPAKGAQWMKQIVSFDKLKLTNNLLDDNGHI---ILNSMHRYQPRFHVVYVDPRKDS 308

  Fly   469 LKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTG-----AGKREKKQALMS- 527
            .|.....::|:||:||.|.|||||||.:||||||.:|||||||||..     ...|.....:|| 
Zfish   309 EKYAEENYKTFVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHRPGSLQIMSA 373

  Fly   528 -----NRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPL 587
                 |..|...:.|.|....||.......:|.|.|..|...|:       .::|       ||.
Zfish   374 FARTRNPMSSPPQQNGTEKEDSRREYDRDPSGNPLHSDPTHQLM-------SRVL-------SPA 424

  Fly   588 LPLSHSLQQMHA--------------------------HQHSAALAAWFNHLAGA---------- 616
            ||:   |..:||                          |.|.....|.:.|..||          
Zfish   425 LPV---LGGLHAVPLTAGPRSPPHELRLDGHPQPPDTLHHHPYKYPATYEHYLGAKTRPSPYPSP 486

  Fly   617 ---GAGASEHAAAAAAN 630
               |.|...|.....||
Zfish   487 SIRGHGYHPHMNPTTAN 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 2/57 (4%)
T-box 330..513 CDD:279278 106/192 (55%)
tbx1XP_005168668.1 TBOX 165..355 CDD:238106 107/192 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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