DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and Tbx19

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001381159.1 Gene:Tbx19 / 304935 RGDID:1310145 Length:448 Species:Rattus norvegicus


Alignment Length:561 Identity:168/561 - (29%)
Similarity:233/561 - (41%) Gaps:151/561 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 VAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSG 367
            |:..|:.....|:|.:.:.|......::.||...||::|.::..||::||:||:|||.:|..|:|
  Rat    16 VSRLLNVVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTG 80

  Fly   368 LDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKL 432
            ||..|.|.||||.|..|.:|:|:.|..|:.|||.:......:|||||||..|..||:..:||.|:
  Rat    81 LDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKV 145

  Fly   433 KLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKI 497
            ||||.:|..    ...:|||:|||:|:.|:||.....::..:.    .|.||:||||||||||:|
  Rat   146 KLTNKLSGG----GQIMLNSLHKYEPQVHIVRVGGAHRMVMNC----SFPETQFIAVTAYQNEEI 202

  Fly   498 TQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPH 562
            |.|||..|||||.|.|.    :|:...          |..|..||.|:   |:.::      |..
  Rat   203 TALKIKYNPFAKAFLDA----KERNHL----------KEIPEAVSESQ---HVTYS------HLG 244

  Fly   563 AALLDNQQDDDDKLLDVVGPPQ----SPL-LPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASE 622
            ..:|.|...     :...|...    :|| ||..|:       :|..      .|.||       
  Rat   245 GWILSNPDG-----MCTTGSANYQYATPLPLPAPHT-------RHGC------EHYAG------- 284

  Fly   623 HAAAAAANASAEDALRRRLQA---DADVERDGSDS-----SCSESVGGSTGGAFRPTSTGSPKEA 679
                          ||...||   .|.:.|:.|.|     |.|.::...:|    |.|..|...|
  Rat   285 --------------LRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSG----PESWTSLPSA 331

  Fly   680 VGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLLPYLY--PHGLYPPPHLGL-LHNPAAAAA 741
                         |.||....|:.|  .||:|.|...|.|:  .:|...|...|. :|..|:...
  Rat   332 -------------PHGGILSVPHTS--GPINPGPSPYPCLWTISNGGGGPVASGSEVHASASGTF 381

  Fly   742 M--SPAGLNPGLLFNAQLALAA-----QHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSL 799
            :  ||...:|..|...|...:|     ..|:|...|        ||....:.||     .|||  
  Rat   382 LLGSPTVTSPSSLLPTQATTSAGVEVLGEPSLTSIA--------VSTWTAVASH-----PLPG-- 431

  Fly   800 GSAFDAVTPGSNANRSGDPPGGGGGGLGGGVVENGPRSLSS 840
                                .||.||.|    .:.|.||.|
  Rat   432 --------------------WGGPGGAG----RHSPSSLDS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 4/14 (29%)
T-box 330..513 CDD:279278 86/182 (47%)
Tbx19NP_001381159.1 T-box_TBX19-like 36..218 CDD:410327 86/189 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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