DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbxta

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_571237.1 Gene:tbxta / 30399 ZFINID:ZDB-GENE-980526-437 Length:423 Species:Danio rerio


Alignment Length:576 Identity:156/576 - (27%)
Similarity:215/576 - (37%) Gaps:210/576 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 DPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391
            |.|::||..:||.||.:|..||::||:||:|||.::..|:|||..|.|.:|||.||||:.|:|:.
Zfish    34 DIKLSLEDAELWTKFKELTNEMIVTKTGRRMFPVLRASVTGLDPNAMYSVLLDFVAADNNRWKYV 98

  Fly   392 NSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKY 456
            |..|:..||.:|:.|..:|||||||..|..||:..|||.|:||:|.::..    ...:|||:|||
Zfish    99 NGEWVPGGKPEPQSPSCVYIHPDSPNFGAHWMKAPVSFSKVKLSNKLNGG----GQIMLNSLHKY 159

  Fly   457 QPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREK 521
            :||.|:|:...|.|:    ..:..|.||:||||||||||:||.|||.:|||||.|.|.    :|:
Zfish   160 EPRIHIVKVGGIQKM----ISSQSFPETQFIAVTAYQNEEITALKIKHNPFAKAFLDA----KER 216

  Fly   522 KQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSP 586
                       ||                 |...|.|      ..||||....:|          
Zfish   217 -----------SD-----------------HKEVPDH------STDNQQSGYSQL---------- 237

  Fly   587 LLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDG 651
                                                                             
Zfish   238 ----------------------------------------------------------------- 237

  Fly   652 SDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLL 716
                         ||.|.|::                   .|.|.|...|..: |.|:|.|    
Zfish   238 -------------GGWFLPSN-------------------GPMGPSSSPPQFN-GAPVHSS---- 265

  Fly   717 PYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFNAQLALAAQHPALFGHAYAAAGHTPVSP 781
                  |.|...:..|.::                       .||.:|:.:.|......:...:.
Zfish   266 ------GSYCERYSSLRNH-----------------------RAAPYPSHYSHRSTTTNNYMDNS 301

  Fly   782 LQGLKSH-RFSPYSLPGSLGSAFDAVTPGSNANRSG------------DPPGGGGGGLGGGVVEN 833
            ...|.|| .:|...:|.|.|....|.|..:.:|.|.            .|.|...|.:.||:...
Zfish   302 SGSLASHDSWSALQIPNSSGMGTLAHTTNTTSNTSQYPSLWSVAGTTLTPSGSASGSITGGLTSQ 366

  Fly   834 GPRSLSSSPRPRPASHSPPTRPISMSPTTPPSLMKQPRGGGAGAGVAQSQHSPSEL 889
            ..|..|       .|:|..|   |..|.:.||.|..|.....|.|.||.:.|.:.|
Zfish   367 FLRGSS-------MSYSGLT---SSLPVSSPSSMYDPGLSEVGVGDAQFESSIARL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 90/182 (49%)
tbxtaNP_571237.1 TBOX 34..216 CDD:238106 93/193 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..234 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..304 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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