DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and Tbx21

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001100513.1 Gene:Tbx21 / 303496 RGDID:1308264 Length:528 Species:Rattus norvegicus


Alignment Length:718 Identity:197/718 - (27%)
Similarity:265/718 - (36%) Gaps:275/718 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 IVGLPPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPS------------TGAA---APPA- 214
            :.|..|||       |.....:.:...|...:|.:....|:            :|:|   |||. 
  Rat    12 LTGTEPIP-------SDEGRGTGADQQHRFFYPESGAQDPTDRRAVSSLGSSYSGSALVPAPPGR 69

  Fly   215 --GATGLPPPTPPHHLQQQQQQQQHPAP----PPPP----YFPAAALAALAGSPAGPHPGLYPGG 269
              ||...||         :.|....|.|    |||.    |.|....||     ..|..||||| 
  Rat    70 FLGAYAYPP---------RAQATGFPGPGESFPPPAGAEGYPPVDGYAA-----PDPRAGLYPG- 119

  Fly   270 GLRFPPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEG 334
                                   ..||..|.:.:                |..|.:   :|.|..
  Rat   120 -----------------------PREDYALPAGL----------------EVSGKL---RVALSN 142

  Fly   335 KDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAG 399
            ..||.||::..|||:|||.||:|||.:.|.|:||:..:.|.:.:|:|..|.:.:::.:.:|:..|
  Rat   143 HLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLEPTSHYRMFVDVVLVDQHHWRYQSGKWVQCG 207

  Fly   400 KADPEMP-KRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLV 463
            ||:..|| .|:|:|||||.||..||::.|||.|||||||....:......:|.|:||||||.|:|
  Rat   208 KAEGSMPGNRLYVHPDSPNTGAHWMRQEVSFGKLKLTNNKGASNNVTQMIVLQSLHKYQPRLHIV 272

  Fly   464 RANDILKLPYSTFRTYV--FKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALM 526
            ..||.......:..|::  |:||:|||||||||.:|||||||||||||||       ||..:::.
  Rat   273 EVNDGEPEAACSANTHIFTFQETQFIAVTAYQNAEITQLKIDNNPFAKGF-------RENFESMY 330

  Fly   527 SNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPLS 591
                        |.|.:|        ...||  .|:..||.             |.|.||||   
  Rat   331 ------------TSVDTS--------VPSPP--GPNCQLLG-------------GDPYSPLL--- 357

  Fly   592 HSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERDGSDSSC 656
                   ::|:..:                                                   
  Rat   358 -------SNQYPVS--------------------------------------------------- 364

  Fly   657 SESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPSP--NISVGPPIHPSP--HLLP 717
                     ..|.|...|.||:.|..:....    .|...||.:.  .:||.|...||.  ..:|
  Rat   365 ---------SRFYPDLPGQPKDMVSQSYWLG----TPREPSYETEFRAVSVKPTFLPSAPGTTVP 416

  Fly   718 Y------LYPHGLYP-----PPHLGLLHNPAAAAAMSPAG---------LNPGLLFNAQLALAAQ 762
            |      |.|...:|     ||            .|||||         ::|||..:.:..    
  Rat   417 YYRGPDVLAPGAGWPMAPQYPP------------KMSPAGWFRTMRTLPMDPGLGSSEEQG---- 465

  Fly   763 HPALFGHAYAAAGHTPVSPLQ------GL-----KSHRFSPY------SLPGSLGSAFDAVTPGS 810
            .|:|:         |.|:.||      ||     |..|.|||      |.|....|.||..|.|.
  Rat   466 SPSLW---------TEVTSLQPEPSDSGLGEGDTKRRRISPYPSSGDSSSPAGAPSPFDKETEGQ 521

  Fly   811 NAN 813
            ..|
  Rat   522 FYN 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 9/57 (16%)
T-box 330..513 CDD:279278 92/185 (50%)
Tbx21NP_001100513.1 T-box 138..324 CDD:279278 92/192 (48%)
T-box_assoc <392..518 CDD:292794 40/150 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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