DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx16

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:611 Identity:195/611 - (31%)
Similarity:251/611 - (41%) Gaps:217/611 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 PPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLW 338
            ||..|||       |.:|             ||                   .:.::|||..:||
Zfish    16 PPSMPGA-------GDSY-------------HQ-------------------GNIRMTLEDPELW 41

  Fly   339 EKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADP 403
            ..||::||||:|||.||:|||..|..:|||...||||||:|:|..|..|||::..:|.|||||:|
Zfish    42 RSFHEIGTEMIITKPGRRMFPHCKISLSGLVPYAKYILLVDMVPEDGLRYKWNKDKWEVAGKAEP 106

  Fly   404 EMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDI 468
            :.|.|.|:|||||..|..||::.|||.|||||||..|:||.:   ||:|||:|.||||:|:|:|:
Zfish   107 QPPYRTYLHPDSPAPGSHWMKQPVSFLKLKLTNNALDQHGHI---ILHSMHRYHPRFHIVQADDL 168

  Fly   469 LKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKRE------------- 520
            ..:.:|.|:|:.|.||.|.|||||||.|||:||||:|||||||||.|...:.             
Zfish   169 YSVRWSVFQTFTFPETSFTAVTAYQNTKITKLKIDHNPFAKGFRDEGTNSKRRANRNLPDPERVA 233

  Fly   521 KKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLDVVGPPQS 585
            ||.:..|..||..| :.|    ||...|...||||                   |.|:|.....|
Zfish   234 KKMSKDSEHGSPQD-VQP----SSCEALDDEHAGR-------------------KELEVKAERYS 274

  Fly   586 PLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDALRRRLQADADVERD 650
            |                      |    .||....|.||                |:.::.:..|
Zfish   275 P----------------------W----GGACDRDSGHA----------------LRPESPLGSD 297

  Fly   651 GSDSSCSESV--GGSTGGAFR---------PTSTGSPKEAVGAAAAAAAAGLNPGGGS------- 697
            ..|...||.:  |.:|...:|         |:|:.|    ||.::|..:|| .|...|       
Zfish   298 HRDVYSSEQLVPGQNTYQPYRFHEYGKSPSPSSSSS----VGGSSACGSAG-RPSFESRVLDVAT 357

  Fly   698 YPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFNAQLALAAQ 762
            .|..:.|..|...|...|           |||....|...|           |:|   .:|:...
Zfish   358 VPDTDSSSKPSSAPEFSL-----------PPHPSAGHQEYA-----------GVL---NMAITQA 397

  Fly   763 HPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRSGDPPGGGGGGLG 827
            .|.:.|          ..||       :|.||...|||.       .|.|..|..||        
Zfish   398 KPGMLG----------THPL-------YSHYSTEQSLGQ-------WSGAAASQYPP-------- 430

  Fly   828 GGVVENGPRSLSSSPRPRPASHSPPT 853
                            |.|..|..||
Zfish   431 ----------------PPPPHHHLPT 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 9/43 (21%)
T-box 330..513 CDD:279278 107/182 (59%)
tbx16NP_571133.1 TBOX 30..217 CDD:238106 110/189 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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