DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and Tbxt

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_017444362.1 Gene:Tbxt / 292301 RGDID:1310141 Length:437 Species:Rattus norvegicus


Alignment Length:456 Identity:146/456 - (32%)
Similarity:203/456 - (44%) Gaps:103/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 LGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVIT 351
            :.|..|.:....|...|.|.|......|:|...:.|....:.:|.||..:||.:|.:|..||::|
  Rat     1 MSSPGTESAGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVT 65

  Fly   352 KSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSP 416
            |:||:|||.:|..|||||..|.|..|||.||||::|:|:.|..|:..||.:|:.|..:|||||||
  Rat    66 KNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSP 130

  Fly   417 TTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVF 481
            ..|..||:..|||.|:||||.::..    ...:|||:|||:||.|:||...    |.....::.|
  Rat   131 NFGAHWMKAPVSFSKVKLTNKLNGG----GQIMLNSLHKYEPRIHIVRVGG----PQRMITSHCF 187

  Fly   482 KETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRG---------------- 530
            .||:||||||||||:||.|||..|||||.|.|  |.:|...:.:|...|                
  Rat   188 PETQFIAVTAYQNEEITALKIKYNPFAKAFLD--AKERNDHKDVMEEPGDCQQPGYSQSGGWLVP 250

  Fly   531 ---------------SDSDKLNPTHVSSSRAPLHLGHAGRP---PHLHPH----------AALLD 567
                           ..|..|..|| ...|.|....|...|   |:.|.:          |.|..
  Rat   251 GAGTLCPPASSHPQFGGSLSLPSTH-GCERYPTLRNHRSSPYPSPYAHRNNSPTYADNSSACLSM 314

  Fly   568 NQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANAS 632
            .|..|:...|.|  |..:.:||:||:                    |....|:|::.:..:.:  
  Rat   315 LQSHDNWSSLGV--PAHTSMLPVSHN--------------------ASPPTGSSQYPSLWSVS-- 355

  Fly   633 AEDALRRRLQADADVERDGSDSSCSESVGGSTG-GA--FRPTSTGSPKEAVGAAAAAAAAGLNPG 694
                             :|:.:..|::.|.|.| ||  ||    |||..........:||..:..
  Rat   356 -----------------NGTITPGSQTAGVSNGLGAQFFR----GSPAHYAPLTHTVSAATSSSS 399

  Fly   695 G 695
            |
  Rat   400 G 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 8/30 (27%)
T-box 330..513 CDD:279278 93/182 (51%)
TbxtXP_017444362.1 TBOX 42..224 CDD:214656 95/191 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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