DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx15

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001315362.1 Gene:tbx15 / 246222 ZFINID:ZDB-GENE-020529-1 Length:616 Species:Danio rerio


Alignment Length:584 Identity:188/584 - (32%)
Similarity:263/584 - (45%) Gaps:136/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 PAMRPLRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAK 373
            ||.....|..|.....:::.:|.|:..|||::||.:||||:|||:||:|||.|:.::.|||...:
Zfish    91 PADLTSAACDPSPSASMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKIVGLDPHQQ 155

  Fly   374 YILLLDIVAADD--YRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTN 436
            |.:.:|||..|:  |||.:|:|:|||||.||..:|.|:||||||..:|:.||::||||.||||||
Zfish   156 YYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTN 220

  Fly   437 NISDKHGFVSTTILNSMHKYQPRFHLVRANDILKL----PYST---FRTYVFKETEFIAVTAYQN 494
            |..|..|.:   ||:||||||||.|::|.:...:|    |..|   .:|:.|.||.|..||||||
Zfish   221 NELDDQGHI---ILHSMHKYQPRVHVIRKDFSSELSPTKPVPTGEGVKTFSFPETVFTTVTAYQN 282

  Fly   495 EKITQLKIDNNPFAKGFRDTGAGK-------------REKKQAL-------MSNRGSDSDKLNPT 539
            ::||:||||.|||||||||:|..:             |...:.|       |..:...|...:||
Zfish   283 QQITRLKIDRNPFAKGFRDSGRNRTGLEAIMETYAFWRPPVRTLTFEDFTNMQKQQGGSTGTSPT 347

  Fly   540 HVSSSRAP-----LH-LGHAGRPP--HLHPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQ 596
             .||:..|     .| |..:..||  ||.|:..              .||..:|.|..|..|...
Zfish   348 -TSSTGTPSPSGATHLLSPSCSPPTFHLAPNTF--------------NVGCRESQLCNLGLSEYP 397

  Fly   597 MHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAEDAL--RRRLQADADVERDGSDSSCSES 659
            ..|..:.|||.. :..||....|..:....|.|:|.|.::.  :|.....|...:.|:..|.:..
Zfish   398 ACARSNMAALQG-YGGLADGSYGRLQTTGGAVASAQASESFLPQRTSSLIAAGMQGGAHGSLATG 461

  Fly   660 VGGSTGGAFRPTSTGSPKEAVGA--------AAAAAAAGLNPGGGSYPSPNISVGPPIHPSPHLL 716
            ..||..|..:..:.||...:..|        |.|::|:|.:...||..|           |.|:.
Zfish   462 NSGSGSGGGKMDAYGSQLASFPASQLQYVMQAGASSASGSSASSGSSSS-----------SAHMF 515

  Fly   717 PYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFNAQLALAAQHPALFGHAYAAAGHTPVSP 781
            ...:.|......:...||||                :|           |:|:.:.|:.....||
Zfish   516 SGSHHHVQQSTYNAFSLHNP----------------YN-----------LYGYNFPASPRLAASP 553

  Fly   782 --LQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRS-------------GDPPGG--GGGGLGG 828
              .||            |.|.|:..|   |:.|.|.             |:|.|.  |.|...|
Zfish   554 EKPQG------------GLLCSSSSA---GAFAERQYLSNGGMDSMHMIGNPTGSQQGAGSCDG 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 3/8 (38%)
T-box 330..513 CDD:279278 103/191 (54%)
tbx15NP_001315362.1 TBOX 110..305 CDD:238106 106/197 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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