DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and Tbx6

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus


Alignment Length:587 Identity:180/587 - (30%)
Similarity:240/587 - (40%) Gaps:190/587 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 HP-GLYP--GGGLRFPPHHPGA---HPHAHHLGSAY----TTAEDVVLA--SAVAHQLHPAMRPL 314
            || .|||  |.|.|.....|||   .|.|...|..|    |:..|..|:  .|..|.| .|..||
Mouse     3 HPRELYPSLGTGYRLGHPQPGADSTFPPALTEGYRYPDLDTSKLDCFLSGIEAAPHTL-AAAAPL 66

  Fly   315 ----RALQPED-----------DGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFR 364
                .||.||.           .||    .::||.::||::|..:||||:|||:||:|||..:..
Mouse    67 PLLPSALGPETAPPPPEALHSLPGV----SLSLENQELWKEFSAVGTEMIITKAGRRMFPACRVS 127

  Fly   365 VSGLDAKAKYILLLDIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSF 429
            |:|||.:|:|:.|||:|..|..||::....|..:|||:|.:|.|:|||||||.||..||::.|||
Mouse   128 VTGLDPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPATGAHWMRQPVSF 192

  Fly   430 HKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQN 494
            |::||||:..|.||.:   ||:||||||||.|||||..:....:....::.|.||.||:||||||
Mouse   193 HRVKLTNSTLDPHGHL---ILHSMHKYQPRIHLVRATQLCSQHWGGVASFRFPETTFISVTAYQN 254

  Fly   495 EKITQLKIDNNPFAKGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHL 559
            .:||||||..||||||||:.|...:.::.|.:..:                              
Mouse   255 PRITQLKIAANPFAKGFRENGRNCKRERDARVKRK------------------------------ 289

  Fly   560 HPHAALLDNQQDDDDKLLDVVGPPQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHA 624
                               :.||                                       |..
Mouse   290 -------------------LRGP---------------------------------------EPV 296

  Fly   625 AAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAA 689
            |..|..:.                 |.....|..::||....: .|....:|:||..|:|.    
Mouse   297 ATEACGSG-----------------DTPGGPCDSTLGGDIRDS-DPEQAPTPQEAASASAP---- 339

  Fly   690 GLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGLLFN 754
               |.||  ||....:   :||:..       ||  .|.||     ||...:.:.|. :||....
Mouse   340 ---PCGG--PSAEAYL---LHPAAF-------HG--APSHL-----PARTPSFAEAP-DPGRPAP 381

  Fly   755 AQLALAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRSGDPP 819
            ...|.....|...|.||.||...|          .|:|:.:.   |..|....||         |
Mouse   382 YSAAFLDLQPGPGGSAYQAAPSVP----------SFAPHFIQ---GGPFPLPYPG---------P 424

  Fly   820 GG 821
            ||
Mouse   425 GG 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 25/71 (35%)
T-box 330..513 CDD:279278 98/182 (54%)
Tbx6NP_035668.2 TBOX 90..277 CDD:238106 102/193 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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