DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and tbx-39

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:303 Identity:77/303 - (25%)
Similarity:127/303 - (41%) Gaps:74/303 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VTLEGKDLWEKFHKLGTEMVITKSG-RQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNS 393
            ||:..:|.|::::. ..||::...| :.:||::.|.::||:.|::|::||.|...|:.||.:.|.
 Worm     9 VTMAEEDRWKQWYP-NMEMIVNNKGPKLIFPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRNG 72

  Fly   394 RW---MVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNN--ISDKHG--FVSTTILN 451
            :|   .|......|...:.::|||....|::.|::.:.|..:::||:  ..||..  ||.|    
 Worm    73 KWGPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHKKFMDKDNVFFVET---- 133

  Fly   452 SMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAK----GFR 512
             ||||.|...:....::....:| .|..|   .:|..||.|..|.|...|   :.|.|    |.|
 Worm   134 -MHKYVPVLTVKNITNVESANHS-MRMEV---AQFFPVTVYNQESIGNWK---SKFHKNSTYGNR 190

  Fly   513 DTGAGKREK---------------------------KQALMSNRGSDSDKLNPTHVSSSRAPLH- 549
            ..|..||:.                           .|:...|..::|.:|. ..:|||   :| 
 Worm   191 LDGGNKRKNTDSSEERTSKRSKNETEIAVSDILQVASQSENYNESTNSGRLQ-NEISSS---IHQ 251

  Fly   550 ---LGHAGRPPHLHP-----------HAALLD---NQQDDDDK 575
               ..:..:.||.:|           ..||.|   ||.|...|
 Worm   252 FPSTSYQNQYPHAYPTVNTPPIYVQQFTALFDEIHNQFDPKTK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 55/194 (28%)
tbx-39NP_502851.1 T-box 9..180 CDD:279278 52/183 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3847
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.760

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