DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and tbx-42

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_500749.1 Gene:tbx-42 / 190421 WormBaseID:WBGene00022000 Length:308 Species:Caenorhabditis elegans


Alignment Length:287 Identity:74/287 - (25%)
Similarity:131/287 - (45%) Gaps:40/287 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 VTLEGKDLW-EKFHKLGTEMVITKSGR--QMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFH 391
            |.:..::|| |::..:  || |:.|.|  .:||::||::|||:..::|:|:|.:...|:.||..:
 Worm     9 VKMSNEELWKERYPNM--EM-ISNSKRITPIFPEIKFKISGLEENSRYVLVLSLEKMDNIRYGIN 70

  Fly   392 -NSRW--MVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNN--ISDKHGFVSTTILN 451
             |..|  ..|.|..|....:.:.||:....|::.|.:.|.|..:::|.:  :|:|.   :...::
 Worm    71 ENKEWAPSSARKPKPHHNMKFFFHPEGTKLGKELMAETVEFTSVRITTSEKLSEKE---NVFYVH 132

  Fly   452 SMHKYQPRFHLVRANDILKLPYSTFRTYVFKE--TEFIAVTAYQNEKITQLKIDNNPFAK-GFRD 513
            :||||.|      ...|..|......:.:||.  .:|..|:.||...:.:.|.|.|..:. |.|.
 Worm   133 TMHKYVP------VLTIRNLTTGEIASNIFKMEIAQFFPVSIYQQASMGRWKSDLNKHSTFGNRS 191

  Fly   514 TGAGKREKKQAL--MSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKL 576
            .|..||:...|.  :.::.|....:....|.:|...|.:          ..:..|.||  ::..|
 Worm   192 EGGIKRKTSDAAGQLPSKRSSKKPVKKDVVDNSEVTLEV----------KTSQYLVNQ--NESNL 244

  Fly   577 LDVVGPPQSPLLPLSHSLQQMHAHQHS 603
            .:.:  |.|||.. |.:..|...|.:|
 Worm   245 TEYI--PSSPLYS-SQNQYQYPFHPYS 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 53/193 (27%)
tbx-42NP_500749.1 T-box 9..190 CDD:279278 53/192 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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