DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx-11

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_498317.1 Gene:tbx-11 / 185575 WormBaseID:WBGene00006547 Length:322 Species:Caenorhabditis elegans


Alignment Length:290 Identity:81/290 - (27%)
Similarity:136/290 - (46%) Gaps:45/290 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 VDDP-KVTLEG--KDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDY 386
            :|.| .|||..  ..||...|:...|||||.:||::||.:::.|:|||....|.:.:.:...||.
 Worm     1 MDQPISVTLSSTTDPLWRSCHEYDNEMVITVNGRRIFPTLEYTVTGLDTFKLYSMCMHLDLVDDK 65

  Fly   387 RYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILN 451
            :.:|...:|..:...:.:.|.|...|.:...||:.||.:.|||.::::||..|.:.|..|...|.
 Worm    66 KLRFTGGQWAESVSTEKKDPPRKVWHHNGSQTGKDWMLRNVSFDQIRITNRKSKEDGNASYVHLL 130

  Fly   452 SMHKYQPRFHLVRANDIL---KLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRD 513
            :.|:|.|...:...:.::   ::|:|          :||:||||...::..||.:|||::.|.| 
 Worm   131 TQHRYIPVLTIYEGDQLVHTARIPHS----------QFISVTAYHKGELNTLKTNNNPYSTGSR- 184

  Fly   514 TGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDKLLD 578
              ..:|.::|:.:.:.|:.|:|      |.|..|     |.:...:.|  ||.|........||.
 Worm   185 --KDRRRERQSPVYSEGTSSEK------SISPPP-----AKKIKDMAP--ALPDYSVISKPNLLQ 234

  Fly   579 VV-------------GPPQSPLLPLSHSLQ 595
            .:             .||..|:.|.:..||
 Worm   235 SLIFPMIAEQPSTSQSPPAPPVFPFNPDLQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988
T-box 330..513 CDD:279278 57/187 (30%)
tbx-11NP_498317.1 TBOX 4..189 CDD:238106 59/197 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.