DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and TBR1

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_006584.1 Gene:TBR1 / 10716 HGNCID:11590 Length:682 Species:Homo sapiens


Alignment Length:675 Identity:204/675 - (30%)
Similarity:272/675 - (40%) Gaps:174/675 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 NLVAVSPTGGGAQLSPQSNHSSSNTTTTSNTNNSSSNNNNNNSTHNNNNNHTNNNNNNNNNTSQK 144
            |:.:..|..||::|   ..|.....:||.|...||.........  .|.:.|:|..::.::....
Human    19 NVSSSYPHSGGSEL---VLHDHPIISTTDNLERSSPLKKITRGM--TNQSDTDNFPDSKDSPGDV 78

  Fly   145 QGHHLSTTEEPPSPAGTPPPTIVGLPPIPPPNNNSSS-----SSSNNSASAAAHPS-HHPTAAHH 203
            |...||             |.:.|:..:....:.|::     |.|:...|||..|| ..|....|
Human    79 QRSKLS-------------PVLDGVSELRHSFDGSAADRYLLSQSSQPQSAATAPSAMFPYPGQH 130

  Fly   204 SPSTGAAAPPAGATGLPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALA--GSPAGPHPGLY 266
            .|     |.||.:.|.|.....||                |.....|..:|.  .||.|     |
Human   131 GP-----AHPAFSIGSPSRYMAHH----------------PVITNGAYNSLLSNSSPQG-----Y 169

  Fly   267 PGGGLRFPPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVT 331
            |..|          :|:....|.:|..|.....:|.     .|.:.|.:|            :|.
Human   170 PTAG----------YPYPQQYGHSYQGAPFYQFSST-----QPGLVPGKA------------QVY 207

  Fly   332 LEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADDYRYKFHNSRWM 396
            |..:.||.|||:..|||:|||.||:|||.:.|.:||||..|.|.:.:|::.||...::|...:|:
Human   208 LCNRPLWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWRFQGGKWV 272

  Fly   397 VAGKADPEMP-KRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRF 460
            ..||||..:. .|:|:|||||.||..||::.:||.|||||||....:......:|.|:||||||.
Human   273 PCGKADTNVQGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRL 337

  Fly   461 HLVRAN----DILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREK 521
            |:|..|    :....| ...:|:.|.||:|||||||||..|||||||:|||||||||        
Human   338 HVVEVNEDGTEDTSQP-GRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRD-------- 393

  Fly   522 KQALMSN-----RGSDSDKLNPTHVSSSR--------------------------APLHLGHAGR 555
                  |     .|.|.|:|.|:...|.|                          |..|.|....
Human   394 ------NYDTIYTGCDMDRLTPSPNDSPRSQIVPGARYAMAGSFLQDQFVSNYAKARFHPGAGAG 452

  Fly   556 P--------PHLHPHAALLDNQQDDDDKLLDVVGPPQSP----LLPLSHSLQQMHAHQHSAALAA 608
            |        ||.:   .||..||.:|.      |.| ||    :.|.::.| ...|..:..|   
Human   453 PGPGTDRSVPHTN---GLLSPQQAEDP------GAP-SPQRWFVTPANNRL-DFAASAYDTA--- 503

  Fly   609 WFNHLAGAGAGASEHAAAA--AANASAEDALRRRLQADADVERDGSDSS---CSESVGGSTGGAF 668
              ...||..|....:|||.  |....|.....|.|...||....|:.|.   |     |:..|:.
Human   504 --TDFAGNAATLLSYAAAGVKALPLQAAGCTGRPLGYYADPSGWGARSPPQYC-----GTKSGSV 561

  Fly   669 RPTSTGSPKEAVGAAAAAAAAGLNP 693
            .|....|      |||||..||.||
Human   562 LPCWPNS------AAAAARMAGANP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 12/57 (21%)
T-box 330..513 CDD:279278 93/187 (50%)
TBR1NP_006584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..83 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127 8/18 (44%)
T-box_TBR1 203..393 CDD:410330 94/202 (47%)
T-box_assoc 418..680 CDD:406561 47/190 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..483 13/45 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..658
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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