DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx19

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_003198807.1 Gene:tbx19 / 100538180 ZFINID:ZDB-GENE-110411-5 Length:436 Species:Danio rerio


Alignment Length:590 Identity:163/590 - (27%)
Similarity:222/590 - (37%) Gaps:207/590 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 LRALQPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLL 378
            |:|.:.:.|......||:||..:||.||.::..||::||:||:|||.:|..|:|||..|.|..||
Zfish    35 LQAGREKGDPTEKQLKVSLEDAELWRKFKEVTNEMIVTKNGRRMFPVLKVSVTGLDPNAMYSFLL 99

  Fly   379 DIVAADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHG 443
            |...||.:|:|:.|..|:.|||.:|.....:|||||||..|..||:..|||:|:||||.::..  
Zfish   100 DFTPADGHRWKYVNGEWVPAGKPEPHSHSCVYIHPDSPNFGAHWMKAPVSFNKVKLTNKLNGG-- 162

  Fly   444 FVSTTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFA 508
              ...:|||:|||:|:.|:||...    .:.......|.:|:||||||||||:||.|||.:||||
Zfish   163 --GQIMLNSLHKYEPQIHIVRVGG----SHRMVTNISFTDTQFIAVTAYQNEEITALKIKHNPFA 221

  Fly   509 KGFRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRAPLHLGHAGRPPHLHPHAA-LLDNQQDD 572
            |.|.|.            ..|....:.|.|        |:...|.|     .||.. .:.|    
Zfish   222 KAFLDA------------KERSHPKNHLEP--------PVENQHMG-----IPHCGWFISN---- 257

  Fly   573 DDKLLDVVGP--PQSPLLPLSHSLQQMHAHQHSAALAAWFNHLAGAGAGASEHAAAAAANASAED 635
            .|.|....|.  |....|||:|   ..|.::|..:|                |...||       
Zfish   258 PDSLCSASGGNFPYPGGLPLTH---HHHGYKHYPSL----------------HGHRAA------- 296

  Fly   636 ALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAAAGLNPGGGSYPS 700
                                                                         .|||
Zfish   297 -------------------------------------------------------------PYPS 300

  Fly   701 PNISVGPPIHPSPH----LLPYLYP-------H----GLYPPPHLGLLHNPAAAAAMSPAGLNPG 750
            |.:   |..|...|    |...|.|       |    |:.||       .|||..:|.||..:||
Zfish   301 PYL---PRHHHRGHNTVSLSDNLSPGVQMFSGHESWTGVSPP-------GPAAMLSMQPAPNSPG 355

  Fly   751 LLFNAQLALAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRS 815
                    .::|:|.|:..:......:|                 ||.:.|    :|.|.     
Zfish   356 --------ASSQYPCLWTVSSCTVSSSP-----------------PGGVVS----LTHGQ----- 386

  Fly   816 GDPPGGGGGGLGGGVVENGPRSLSSSPRPRPASHSPPTRPISMSPTTPPSLMKQPRGGGAGAGVA 880
             |.|..|.             |.|:||.....:|.|.....|:.|.....:     ||.:.|.| 
Zfish   387 -DEPADGA-------------STSASPCSLLQAHGPTGSDGSVDPANHSRV-----GGMSWASV- 431

  Fly   881 QSQHS 885
             :.||
Zfish   432 -TTHS 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 2/3 (67%)
T-box 330..513 CDD:279278 87/182 (48%)
tbx19XP_003198807.1 TBOX 48..230 CDD:238106 89/201 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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