DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bi and tbx18

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:XP_002933971.1 Gene:tbx18 / 100489044 XenbaseID:XB-GENE-489907 Length:578 Species:Xenopus tropicalis


Alignment Length:678 Identity:189/678 - (27%)
Similarity:275/678 - (40%) Gaps:203/678 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 QQQQQQQQ-----------------------HPAPPPPPYFPAAALAALAGSPA-GPHPGLYPGG 269
            ||||::::                       |...|.||....:..:.||.||. ..:.|:..|.
 Frog    29 QQQQKKKRKRAEDGAVERVAHSDGADGASSLHLPQPGPPELEHSVCSILASSPCEDTYGGVKSGN 93

  Fly   270 GLRFPPHHPGAHPHAHHLGSAYTTAEDVVLASAVAHQLHPAMRPLRALQPEDDGVVDDPKVTLEG 334
            |   |...|...|                   ||..|..|.                  :|.|:|
 Frog    94 G---PCRSPITPP-------------------AVPAQTAPV------------------RVDLQG 118

  Fly   335 KDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVAADD--YRYKFHNSRWMV 397
            .:||::||::||||:|||:||:|||.|:.:::|||...:|.:.:|||..|:  |||.:|:|:|||
 Frog   119 AELWKRFHEIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMDIVPVDNKRYRYVYHSSKWMV 183

  Fly   398 AGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHL 462
            ||.||..:|.|:|||||||.:||.||::|:||.|||||||..|..|.:   ||:||||||||.|:
 Frog   184 AGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLKLTNNELDDQGHI---ILHSMHKYQPRVHV 245

  Fly   463 VR------ANDILKLPYST-FRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKRE 520
            :|      .:.:..:|... .:.:.|.||.|..||||||::||:||||.|||||||||:|. .|.
 Frog   246 IRKDCGEELSPVKPIPVGEGEKAFSFPETIFTTVTAYQNQQITRLKIDRNPFAKGFRDSGR-NRM 309

  Fly   521 KKQALMSNRGSDSDKLN----------PTHVSSSRAPLHLGHAGRPPHLHPHAALLDNQQDDDDK 575
            ..:||:.:.......|.          |...|:..:.|..|......|.|    ||..       
 Frog   310 GLEALVESYAFWRPSLRTLTFEDIPGIPKQGSAGASSLLSGSGAANSHAH----LLPG------- 363

  Fly   576 LLDVVGPPQSPLLPLSHSLQQ----------------MHAHQHSAALAAWFNHLAGAGAGASEHA 624
                 .|..||...:..:..|                :..:::|..||..:|.|           
 Frog   364 -----SPCSSPAFHIGANTSQLCGLTPGDYSACGRSSLALNRYSTTLAETYNRL----------- 412

  Fly   625 AAAAANASAEDALRRRLQADADVERDGSDSSCSESVGGSTGGAFRPTSTGSPKEAVGAAAAAAA- 688
                .|:::|.....|..:               .||.::..|...:..|:..|..|....:.: 
 Frog   413 ----TNSTSESFATPRTPS---------------YVGMTSSTAMNMSMAGNDNETFGCPQTSLSM 458

  Fly   689 --AGLNPGGGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPPHLGLLHNPAAAAAMSPAGLNPGL 751
              :|::| ...|..|:.:........||...|          :...||:|.              
 Frog   459 QISGMSP-QLQYIMPSPTSNAFSSSQPHQSSY----------NAFRLHSPC-------------- 498

  Fly   752 LFNAQLALAAQHPALFGHAYAAAGHTPVSPLQGLKSHRFSPYSLPGSLGSAFDAVTPGSNANRSG 816
                         ||:|:.::      .||  .|.|   ||..:..|.||...:...|:..:|..
 Frog   499 -------------ALYGYNFS------TSP--KLAS---SPEKILSSQGSFLGSSPSGTMTDRQI 539

  Fly   817 DPPGGGGGGLGGGVVEN--GPRSLSSSP 842
            .||..|...|.....:|  ..|||...|
 Frog   540 LPPVEGVHLLSSAGQQNFFDSRSLGGLP 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 10/57 (18%)
T-box 330..513 CDD:279278 101/191 (53%)
tbx18XP_002933971.1 TBOX 111..307 CDD:238106 105/217 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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