DRSC/TRiP Functional Genomics Resources

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Protein Alignment bi and tbx5b

DIOPT Version :9

Sequence 1:NP_001259238.1 Gene:bi / 31379 FlyBaseID:FBgn0000179 Length:1023 Species:Drosophila melanogaster
Sequence 2:NP_001185700.1 Gene:tbx5b / 100004161 ZFINID:ZDB-GENE-060601-2 Length:422 Species:Danio rerio


Alignment Length:319 Identity:137/319 - (42%)
Similarity:183/319 - (57%) Gaps:33/319 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 QPEDDGVVDDPKVTLEGKDLWEKFHKLGTEMVITKSGRQMFPQMKFRVSGLDAKAKYILLLDIVA 382
            |...:|:    ||.|..||||.|||.:.|||:|||:||:|||..|.:|:||:.|||||||:||::
Zfish    47 QQSMEGI----KVYLHEKDLWAKFHDVTTEMIITKAGRRMFPSYKVKVTGLNPKAKYILLMDIIS 107

  Fly   383 ADDYRYKFHNSRWMVAGKADPEMPKRMYIHPDSPTTGEQWMQKVVSFHKLKLTNNISDKHGFVST 447
            ||::||||.:::|.::|||:|.:|.|:|:|||||.:|..||:::|||.|||||||..|..|.:  
Zfish   108 ADEHRYKFADNKWSISGKAEPAIPGRLYVHPDSPASGAHWMRQLVSFQKLKLTNNHLDPFGHI-- 170

  Fly   448 TILNSMHKYQPRFHLVRANDILKLPYS--TFRTYVFKETEFIAVTAYQNEKITQLKIDNNPFAKG 510
             |||||||||||.|:|:|::......|  :|.|:.|.||.|||||:|||..||||||:|||||||
Zfish   171 -ILNSMHKYQPRLHIVKADERNSFGSSNTSFCTHSFAETTFIAVTSYQNHTITQLKIENNPFAKG 234

  Fly   511 FRDTGAGKREKKQALMSNRGSDSDKLNPTHVSSSRA----PLHLGHAGRPPHLHPHAALLDNQQD 571
            ||    |..:.:...||...|....|.|...:..||    |..|..:.......|......:...
Zfish   235 FR----GNDDIELHRMSRTPSKEYPLVPRSTARQRAAPPSPDCLSRSEYTVTQKPSPGFTCSDTS 295

  Fly   572 DDDKLLDV--VGPPQSPLLPLSHSL------QQMHAHQHSAALAAWFNHLAGAGAGASE 622
            .|..|.:.  :..|..||  .|:.|      ..|...||...:      ..|:..|..|
Zfish   296 GDQSLTETPSIHDPTYPL--FSYQLSPDVAPSSMDTTQHQPCM------YGGSQVGMEE 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
biNP_001259238.1 Optomotor-blind <260..318 CDD:287988 137/319 (43%)
T-box 330..513 CDD:279278 109/184 (59%)
tbx5bNP_001185700.1 TBOX 52..240 CDD:238106 113/198 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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