DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3626 and amt

DIOPT Version :9

Sequence 1:NP_572162.2 Gene:CG3626 / 31377 FlyBaseID:FBgn0029706 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001006021.1 Gene:amt / 450000 ZFINID:ZDB-GENE-041010-114 Length:409 Species:Danio rerio


Alignment Length:455 Identity:94/455 - (20%)
Similarity:167/455 - (36%) Gaps:111/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 TGR---------NLRMSPIYPQLKEAGAVFGQSMGYERP-NYFDQQDKHDEFGLPRFRIAQTRTF 534
            |||         .||.:|:|...:..|....:..|:..| .|.|                     
Zfish    27 TGRQDRQASTEVTLRKTPLYDFHRAHGGKMVEFAGWSMPVQYKD--------------------- 70

  Fly   535 GKPPWFDHVASEYRACRERIGIADYSSFTKYDFWSKGNEVVDLLQYLCSNDVDVAVGSIIH---- 595
                  .|:.|.... |:...|.|.|...:...:.|     |.::::.|    :.||.|..    
Zfish    71 ------SHITSHMHT-RQHCSIFDVSHMLQTKVYGK-----DRVKFIES----LIVGDIAELKDN 119

  Fly   596 ----TGMQNPNGGYENDCSLARLSERHYMMIAPTIQQTRSMCWIRKHMPNHLRAKV-------NV 649
                :...|..||..:|..:.: :::.|:.:.     :.:.|..:...  |::|::       :.
Zfish   120 QGTLSLFTNSKGGIMDDLIVTK-TDQDYLYVV-----SNAGCADKDSA--HMQARLQEFKSAGHD 176

  Fly   650 ADVTSM-YTAICILGPYSRILLSELTDTDLTPKSFPFFTYKELDVGLADGIRVLNITHTGELGYV 713
            .|:..| .:.|.:.||....:|.:....||  |...|.|.....|....|.||....:|||.|..
Zfish   177 VDLEFMEESLIALQGPSMARVLQKGVGDDL--KKLTFMTSVLTPVFGIQGCRVTRCGYTGEDGVE 239

  Fly   714 LYIPNEYALHVYSRLYQAGQKFNIQHAGYYATRALRIEKFYAFWGQDLDTFTTPLECGRSWRV-- 776
            :.:|::..:.:..:|....:   ::.||..|..:||:|.....:|.|:|..|||:|....|.:  
Zfish   240 ISVPSKDVVLLTEKLLADSE---VKLAGLGARDSLRLEAGLCLYGNDIDETTTPVEATLVWTIGK 301

  Fly   777 KFNKPIDFIGRNALLKQREEGVKRMYVQLLLNDHDHEVDMWCWGGEPIYR-------DGVYVGMT 834
            :..:..||.|.:.::.|.:....|..|.|:..            |.|:.:       ||..:|..
Zfish   302 RRRQARDFPGADIIVPQIKAKTPRKRVGLIST------------GPPVRQHTPILSSDGRVIGEV 354

  Fly   835 TTTGYGYTFEKQVCLGFVRN-FDDEGRELPVTNEYVLSGHYEVEVAGVRFEAKVNLHSPNLPTKF 898
            |:.......::.|.:|:|.. |...|..:            :|||......|.|: ..|.:|||:
Zfish   355 TSGCPSPCLKQNVAMGYVETAFSKAGTSI------------QVEVRKKAVPAVVS-KMPFVPTKY 406

  Fly   899  898
            Zfish   407  406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3626NP_572162.2 DAO 70..429 CDD:279590
FAO_M 432..487 CDD:292961 5/15 (33%)
GcvT 480..908 CDD:223481 94/455 (21%)
GCV_T 490..774 CDD:279857 60/300 (20%)
GCV_T_C 783..887 CDD:285832 22/111 (20%)
amtNP_001006021.1 PLN02319 2..407 CDD:177953 94/455 (21%)
GCV_T 46..298 CDD:279857 60/301 (20%)
GCV_T_C 307..399 CDD:285832 23/116 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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