DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment norpA and PLC2

DIOPT Version :9

Sequence 1:NP_001014720.1 Gene:norpA / 31376 FlyBaseID:FBgn0262738 Length:1095 Species:Drosophila melanogaster
Sequence 2:NP_001030660.1 Gene:PLC2 / 819999 AraportID:AT3G08510 Length:581 Species:Arabidopsis thaliana


Alignment Length:615 Identity:174/615 - (28%)
Similarity:258/615 - (41%) Gaps:128/615 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 PRMNEILYPLYEEKRCTEI-------INDYELDEEKKKNVQ--------------MSLDGFKRYL 302
            ||..:.::..|.|.....:       |:..:.|:..:::.|              :.||.|.:||
plant    24 PREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYL 88

  Fly   303 MSDENAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVEMYRQTLLAGCRCVELDC 367
            ..|.|.|:.|.::  :.:||.|::||:|.:.||:||:|.|:....|.......|..|.|.:|||.
plant    89 FGDNNPPLALHKV--HHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDI 151

  Fly   368 WNGKGEDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSEYPVILSFENHCNRAQQYKLAKYCDD 432
            |....:|:..:: ||....|.:....|::||...||..|:|||:::.|:|.....|.|:|:...:
plant   152 WPNSNKDDIDVL-HGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTE 215

  Fly   433 FFGDLLLKEPLPDHPLDPGLPLPPPCKLKRKILIKNKRMK-----PEVEKVEL-------ELW-- 483
            .||::|...|:.:...:    .|.|..|||:|:|..|..|     .:||.|:.       |:|  
plant   216 IFGEILFTPPVGESLKE----FPSPNSLKRRIIISTKPPKEYKEGKDVEVVQKGKDLGDEEVWGR 276

  Fly   484 ----------------LKGELKTDDDPEEDASAGKPPEAAAAPAPAPEAAAAAEGAAEGGGGAEA 532
                            |.|....|||.:||.|....|       |..:...|.......||..|.
plant   277 EVPSFIQRNKSEAKDDLDGNDDDDDDDDEDKSKINAP-------PQYKHLIAIHAGKPKGGITEC 334

  Fly   533 EAAAANYSGSTTNVHPWLSSMVNYAQPIKFQGFDKAIEKNIAHNMSSFAESAGMNYLKQSSIDFV 597
                       ..|.|                 ||....:::...   .|.|...|.||    .|
plant   335 -----------LKVDP-----------------DKVRRLSLSEEQ---LEKAAEKYAKQ----IV 364

  Fly   598 NYNKRQMSRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQSSDLPMQLNQGKFEYNGGCGYLLKP 662
            .:.:..:.||||||||..||||.|.|.|:.|.|||:.|.|.....:.|.||.|..||||||:.||
plant   365 RFTQHNLLRIYPKGTRVTSSNYNPLVGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKP 429

  Fly   663 DFMRRADKD---FDPFADAPVDGVIAAQCSVKVIAGQ----------FLSDKKVGTYVEVDMFGL 714
            |.:.::..|   |||.|..||...:    .|.|..|:          |........|..|.:.|:
plant   430 DLLLKSGSDSDIFDPKATLPVKTTL----RVTVYMGEGWYFDFRHTHFDQYSPPDFYTRVGIAGV 490

  Fly   715 PSDTVKKEFRTRLVANNGLNPVYNEDPFVFR-KVVLPDLAVLRFGVYE----ESGKILGQRILPL 774
            |.|||.|  :|:.:.:|.: |.::|   ||. .:.:|:||:||..|:|    |.....||..||:
plant   491 PGDTVMK--KTKTLEDNWI-PAWDE---VFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPV 549

  Fly   775 DGLQAGYRHVSLRTEANFPMSLPMLFVNIE 804
            ..|..|.|...|.:..........|.|.:|
plant   550 WELSEGIRAFPLHSRKGEKYKSVKLLVKVE 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
norpANP_001014720.1 PH_PLC_beta 17..149 CDD:270167
PLN02952 224..786 CDD:178538 170/595 (29%)
EF-hand_like 227..318 CDD:286375 16/79 (20%)
PI-PLCc_beta 318..653 CDD:176533 105/364 (29%)
C2_PLC_like 689..806 CDD:175974 37/131 (28%)
DUF1154 866..908 CDD:284131
Mer2 <887..1003 CDD:286200
PLC2NP_001030660.1 PLN02222 1..581 CDD:177868 174/615 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 112 1.000 Domainoid score I2055
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 1 1.000 - - FOG0000126
OrthoInspector 1 1.000 - - mtm1043
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10336
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.920

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