DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment norpA and Plcd3

DIOPT Version :9

Sequence 1:NP_001014720.1 Gene:norpA / 31376 FlyBaseID:FBgn0262738 Length:1095 Species:Drosophila melanogaster
Sequence 2:NP_690026.2 Gene:Plcd3 / 72469 MGIID:107451 Length:785 Species:Mus musculus


Alignment Length:708 Identity:233/708 - (32%)
Similarity:356/708 - (50%) Gaps:99/708 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 PDAATAKIWLDGIRKITHNVKANNICPMMCLRK---HWMRLSYC----VEKSGKI---PVKTLAK 177
            |.|..|:.|:.|:.|:...:.|      |..|:   ||:. ||.    .::..|:   .:|:|.:
Mouse   151 PTAEEAQRWVRGLAKLRARLDA------MSQRERLDHWIH-SYLHRADSDQDSKMSFKEIKSLLR 208

  Fly   178 TFASGKTEKLVYTCIKDAGLPDDKNATMTKEQFTFDKFYALYHKVCPRNDIEELFTSITKGKQDF 242
            .......:...|...|:.   |..|    .|:....:..|...::..|.::||:|...: |:...
Mouse   209 MVNVDMNDMYAYRLFKEC---DHSN----NERLEGAEIEAFLRRLLKRPELEEIFRRYS-GEDRV 265

  Fly   243 ISLEQFIQFMNDKQRDPRMNEILYPLYEEKRCT-EIINDYELDEEKKKNVQMSLDGFKRYLMSDE 306
            :|..:.::|:.|:..|.          ....|. ::|..|||:|..|::..|:||||..||:|.|
Mouse   266 LSASELLEFLEDQGEDG----------ATLACAQQLIQTYELNETAKQHELMTLDGFMMYLLSPE 320

  Fly   307 NAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVEMYRQTLLAGCRCVELDCWNGK 371
            .|.:.:.....:.:|.||||||:|:|||||||:..||||.||.|.|.:....||||||||||.|.
Mouse   321 GAALNVAHTCVFQDMGQPLAHYFISSSHNTYLTDSQIGGTSSTEAYIRAFAQGCRCVELDCWEGP 385

  Fly   372 GEDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSEYPVILSFENHCNRAQQYKLAKYCDDFFGD 436
            |  .||::.|||...::|||:|.|||:.|.||.||.||||||.||||...||..:|::.....||
Mouse   386 G--GEPVIYHGHTLTSKILFRDVIQAVRDHAFTSSPYPVILSLENHCGLEQQAVMARHLRSILGD 448

  Fly   437 LLLKEPLPDHPLDPGLP--LPPPCKLKRKILIKNKRMKPEVEKVELELWLKGELKTDDDPEEDAS 499
            :|:.:     .||...|  ||.|.:||.:||:|.|:: |.....:      |.:.:|.:.||   
Mouse   449 MLVTQ-----ALDSQNPEELPSPEQLKGRILVKGKKL-PAARSED------GRILSDREEEE--- 498

  Fly   500 AGKPPEAAAAPAPAPEAAAAAEGAAEGGGGAEAEAAAANYSGSTTNVHPWLSSMVNYAQPIKFQG 564
                           |....||.|.|          ||........:.|.||::..|....:.:.
Mouse   499 ---------------EEEEEAEEALE----------AAEQRSRAKQISPELSALAVYCCATRLRT 538

  Fly   565 FDKAIEKNIAHNMSSFAESAGMNYLKQSSIDFVNYNKRQMSRIYPKGTRADSSNYMPQVFWNAGC 629
            .|.:.....:..:.|.:|.....:.:::...||.:|.:|::|:||.|.|.:|:||.||..||:||
Mouse   539 LDPSPGPPQSCTVGSLSERKARKFTREAGTSFVRHNTQQLTRVYPLGLRMNSANYNPQEMWNSGC 603

  Fly   630 QMVSLNFQSSDLPMQLNQGKFEYNGGCGYLLKPDFMRRADKDFDPFADAPVDGVIAAQCSVKVIA 694
            |:|:||||:....|.||.|:|..||.|||:|||.::|:.:..|||....|....:|    ::|:.
Mouse   604 QLVALNFQTPGYEMDLNTGRFLINGQCGYVLKPAYLRQLNTTFDPECPGPPRTTLA----IQVLT 664

  Fly   695 GQFL----SDKK---VGTYVEVDMFGLPSDTVKKEFRTRLVANNGLNPVYNEDPFVFRKVVLPDL 752
            .|.|    ::|.   |...|.|::.|:|.|..:||  |..|.|||.||.: |....|| :..|:|
Mouse   665 AQQLPKLNAEKPSSIVDPLVRVEIHGVPEDCAQKE--TDYVLNNGFNPCW-EQTLQFR-LRAPEL 725

  Fly   753 AVLRFGV--YEES--GKILGQRILPLDGLQAGYRHVSLRTEANFPMSLPMLFVNIELK 806
            .::||.|  |:.:  ...:||..|||..|:.||||:.|.::....::...|||:|.::
Mouse   726 VLVRFVVEDYDTTSPNDFVGQSTLPLSSLKQGYRHIHLLSKDGASLAPATLFVHIRIQ 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
norpANP_001014720.1 PH_PLC_beta 17..149 CDD:270167 7/25 (28%)
PLN02952 224..786 CDD:178538 206/575 (36%)
EF-hand_like 227..318 CDD:286375 25/91 (27%)
PI-PLCc_beta 318..653 CDD:176533 128/336 (38%)
C2_PLC_like 689..806 CDD:175974 43/127 (34%)
DUF1154 866..908 CDD:284131
Mer2 <887..1003 CDD:286200
Plcd3NP_690026.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
PH_PLC_delta 61..177 CDD:270169 8/31 (26%)
PH 66..163 CDD:278594 4/11 (36%)
Substrate binding. /evidence=ECO:0000250 69..97
EF-hand_10 197..246 CDD:291454 9/55 (16%)
PLN02228 251..778 CDD:177873 207/587 (35%)
EF-hand_like 251..332 CDD:286375 25/91 (27%)
PI-PLCc_delta3 332..627 CDD:176567 128/336 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..517 11/66 (17%)
C2_PLC_like 656..783 CDD:175974 44/134 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 1 1.000 - - FOG0000126
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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