DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment norpA and Plcd3

DIOPT Version :10

Sequence 1:NP_525069.2 Gene:norpA / 31376 FlyBaseID:FBgn0262738 Length:1095 Species:Drosophila melanogaster
Sequence 2:NP_001099315.3 Gene:Plcd3 / 287745 RGDID:1310903 Length:785 Species:Rattus norvegicus


Alignment Length:803 Identity:242/803 - (30%)
Similarity:386/803 - (48%) Gaps:120/803 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KENDFERDALFKVDEYGFFLYWK---SEGRDGDVIELCQVSDIRAGGTPKDPKILDKVTKKNGTN 95
            :...:.::.|:::.|.|..::::   .......:..:..:..:|.|...      :.:.:..|..
  Rat    71 RSRTWHKERLYRLQEDGLSVWFQRRIPRAASQHIFFVQHIEAVREGHQS------EGLRRFGGAF 129

  Fly    96 IPELDKRSLTIC-----SNTDYINITYHHVICPDAATAKSWQKNLRLITHNNRATNVCPRVNLMK 155
            .|   .|.|||.     .|.|        :..|.|..|:.|.:.|..:.....|.:...|::   
  Rat   130 AP---ARCLTIAFKGRRKNLD--------LAAPTAEEAQRWVRGLAKLRARLDAMSQRE
RLD--- 180

  Fly   156 HWMRLSYC----VEKSGKI---PVKTLAKTFASGKTEKLVYTCIKDAGLPDDKNATMTKEQFTFD 213
            ||:. ||.    .::..|:   .:|:|.:.......:...|...|:.   |..|    .|:....
  Rat   181 HWIH-SYLHRADSDQDSKMSFKEIKSLLRMVNVDMNDMYAYRLFKEC---DHSN----NERLEGA 237

  Fly   214 KFYALYHKVCPRNDIEELFTSITKGKQDFISLEQFIQFMNDKQRDPRMNEILYPLYEEKRCTE-I 277
            :..|...::..|.::||:|...: |:...:|..:.::|:.|:..|.          ....|.: :
  Rat   238 EIEAFLRRLLKRPELEEIFRRYS-GEDRVLSASELLEFLEDQGEDG----------ATLACAQKL 291

  Fly   278 INDYELDEEKKKNVQMSLDGFKRYLMSDENAPVFLDRLDFYMEMDQPLAHYYINSSHNTYLSGRQ 342
            |..|||:|..|::..|:||||..||:|.|.|.:.:.....:.:|.||||||:|:|||||||:..|
  Rat   292 IQTYELNETAKQHELMTLDGFMMYLLSPEGAALNVAHTCVFQDMGQPLAHYFISSSHNTYLTDSQ 356

  Fly   343 IGGKSSVEMYRQTLLAGCRCVELDCWNGKGEDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSE 407
            |||.||.|.|.:....||||||||||.|.|  .||::.|||...::|||:|.|||:.|.||..|.
  Rat   357 IGGTSSTEAYIRAFTQGCRCVELDCWEGPG--GEPVIYHGHTLTSKILFRDVIQAVRDHAFTLSP 419

  Fly   408 YPVILSFENHCNRAQQYKLAKYCDDFFGDLLLKEPL-PDHPLDPGLPLPPPCKLKRKILIKNKRM 471
            ||||||.||||...||..:|::..:..||:|:.:.| ..:|.:    ||.|.:||.::|:|.|::
  Rat   420 YPVILSLENHCGLEQQIVMARHLRNILGDMLVTQALDSQNPEE----LPSPEQLKCRVLVKGKKL 480

  Fly   472 KPEVEKVELELWLKGELKTD-DDPEEDASAGKPPEAAAAPAPAPEAAAAAEGAAEGGGGAEAEAA 535
             |.....:      |.:.:| :|.:||..               ||..|.|       .||....
  Rat   481 -PAARNED------GRILSDREDEDEDEE---------------EAEEALE-------TAEQRKR 516

  Fly   536 AANYSGSTTNVHPWLSSMVNYAQPIKFQGFDKAIEKNIAHNMSSFAESAGMNYLKQSSIDFVNYN 600
            |...|       |.||::|.|....:.:..:.:........:.|.:|.....:.:::...||.:|
  Rat   517 AKQIS-------PELSALVVYCCATRLRTLEPSPGPPQPCKIGSLSERKARKFTREAGTSFVRHN 574

  Fly   601 KRQMSRIYPKGTRADSSNYMPQVFWNAGCQMVSLNFQSSDLPMQLNQGKFEYNGGCGYLLKPDFM 665
            .:|::|:||.|.|..|:||.||..||:|||:|:||||:....|.||.|:|..||.|||:|||.::
  Rat   575 TQQLTRVYPLGLRMTSANYNPQEMWNSGCQLVALNFQTPGYEMDLNTGRFLINGQCGYVLKPAYL 639

  Fly   666 RRADKDFDPFADAPVDGVIAAQCSVKVIAGQFL-------SDKKVGTYVEVDMFGLPSDTVKKEF 723
            |:.:..|||....|....:    :|:|:..|.|       .:..|...|.|:::|:|.|...|| 
  Rat   640 RQLNTTFDPECPGPPRTTL----TVQVLTAQQLPKLNVEKPNSIVDPLVRVEIYGVPEDCAHKE- 699

  Fly   724 RTRLVANNGLNPVYNED-PFVFRKVVLPDLAVLRFGV--YEES--GKILGQRILPLDGLQAGYRH 783
             |..|.|||.||.:.:. .|..|   .|:|.::||.|  |:.:  ...:||..|||:.|:.||||
  Rat   700 -TDYVLNNGFNPCWEQTLQFQLR---APELVLVRFVVEDYDTTSPNDFVGQFTLPLNSLKQGYRH 760

  Fly   784 VSLRTEANFPMSLPMLFVNIELK 806
            :.|.::....:|...|||:|.::
  Rat   761 IHLLSKDGASLSPATLFVHIRIE 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
norpANP_525069.2 PH_PLC_beta 17..149 CDD:270167 19/122 (16%)
EFh_NorpA_like 154..306 CDD:320042 37/159 (23%)
EF-hand motif 154..183 CDD:320042 7/35 (20%)
EF-hand motif 189..218 CDD:320042 5/28 (18%)
EF-hand motif 227..256 CDD:320042 7/28 (25%)
EF-hand motif 273..306 CDD:320042 15/33 (45%)
PI-PLCc_beta 318..653 CDD:176533 127/336 (38%)
C2_PLC_like 689..806 CDD:175974 43/128 (34%)
DUF1154 865..909 CDD:461969
PLC-beta_C 952..1073 CDD:462571
Plcd3NP_001099315.3 PH_PLC_delta 61..177 CDD:270169 19/122 (16%)
EF-hand_10 197..246 CDD:405477 9/55 (16%)
PLN02228 251..783 CDD:177873 208/593 (35%)
PI-PLCc_delta3 332..627 CDD:176567 127/336 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.