DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment norpA and plc-4

DIOPT Version :9

Sequence 1:NP_001014720.1 Gene:norpA / 31376 FlyBaseID:FBgn0262738 Length:1095 Species:Drosophila melanogaster
Sequence 2:NP_501213.1 Gene:plc-4 / 177525 WormBaseID:WBGene00004039 Length:751 Species:Caenorhabditis elegans


Alignment Length:842 Identity:217/842 - (25%)
Similarity:363/842 - (43%) Gaps:174/842 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NEKETKE--NDFERDALF------KVDEYGF-------FL-----YW--------KSEGRDGDVI 65
            :|::|||  ...|:.:|.      ||.|...       ||     ||        ||       :
 Worm    17 DEEKTKEELEWAEKGSLLCRIKNQKVKEMALVTIKSKQFLNYYSSYWFNFVPNALKS-------V 74

  Fly    66 ELCQVSDIRAGGTPKDPKILDKVTKKNGTNIPELDKRSLTICSNTDYINITYHHVICPDAATAKI 130
            .|.::.::|:|....:   |.:.:||  ....||...|.  |.:..:.:..:.|.....:|.:|.
 Worm    75 ALSELLEVRSGYQTDN---LQRASKK--YEFQELAPESR--CFSVIFSHAKFLHKSVDFSADSKE 132

  Fly   131 WLD-GIRKITHNVKANNICPMMCLRKH---------WMRLSY---CVEKSGKI---PVKTLAKTF 179
            ..| .:..:||         ::.:.||         |:...:   ...|:|.:   .|..|.|..
 Worm   133 TRDKWVSVLTH---------LISVAKHQRVVFNETAWLIDKFQQADTNKNGLLSFDEVWNLLKRM 188

  Fly   180 ASGKTEKLVYTCIKDAGLPDDKNATMTKEQFTFDKFYALYHKVCPRNDIEELFTSITKGKQDFIS 244
            ....:|:......:::...:.::..:.:::     |...:.::..|.|:..:.|..:....:.::
 Worm   189 NLQISERYAKAIFRESEFENSRDNKLNEKE-----FLNFFERLTDRPDLRFVMTQASSDNVETLT 248

  Fly   245 LEQFIQFMNDKQRDPRMNEILYPLYEEKRCTEIINDYELD-EEKKKNVQMSLDGFKRYLMSDENA 308
            :....:|:.::|.        :...:.|:..:|:..:|.. ::|:|...|.|.|.:| ||.....
 Worm   249 VADLQRFLTEEQG--------FENVDLKKAEQILTTFEQTVQDKQKEKLMGLMGMRR-LMQSRWG 304

  Fly   309 PVFL-DRLDFYMEMDQPLAHYYINSSHNTYLSGRQIGGKSSVEMYRQTLLAGCRCVELDCWNGKG 372
            .||. .....:.:|||||.||::||||||||:|.|:.|:::||.|...|..|.|.:|||.::  |
 Worm   305 NVFKPGHESIFQDMDQPLTHYFVNSSHNTYLTGLQVKGEATVEGYISALRKGARLLELDLFD--G 367

  Fly   373 EDEEPIVTHGHAYCTEILFKDCIQAIADCAFVSSEYPVILSFENHCNRAQQYKLAKYCDDFFGDL 437
            |..||::||...:...|..::.::||...||.:|.|||||:.|||....||..:|....:..||.
 Worm   368 EHGEPVITHKRTFIESITLRNSLEAIKRTAFETSPYPVILTLENHVGFVQQAVMADLFKEILGDS 432

  Fly   438 LLKEPLPDHPLDPGLPLPPPCKLKRKILIKNKRMKPEVEKVELELWLKGELKTDDDPEEDASAGK 502
            |...|...|    ..||..|.|||||.|::.|::..| |.:|             :|:||.|...
 Worm   433 LYIPPKDSH----RHPLSSPNKLKRKFLLRGKKIILE-EDIE-------------EPDEDDSPTD 479

  Fly   503 PPEAAAAPAP-APEAAAAAEGAAEGGGGAEAEAAAANYSGSTTNVHPWLSSMVNYAQPIKFQGFD 566
            ..:....|.| |||.:|..        |..:...:.|.. ...|.||             |.| .
 Worm   480 KDKHHVHPHPVAPELSALI--------GLPSVKLSHNIY-QDVNKHP-------------FDG-S 521

  Fly   567 KAIEKNIAHNMSSFAESAGMNYLKQSSIDFVNYNKRQMSRIYPKGTRADSSNYMPQVFWNAGCQM 631
            .::.:|..:.|.            ::::....|...::.:.||||.|.||||..|.|.|..|.|.
 Worm   522 PSLSENKVYTMF------------EAAVPIFTYTAERLVKSYPKGLRQDSSNMHPMVSWLCGIQS 574

  Fly   632 VSLNFQSSDLPMQLNQGKFEYNGGCGYLLKPDFMRRADKDFDPFADAPVDGV-------IAAQCS 689
            |::|||::...:.||.|.|..||.|||:|||..:              :|||       ...:..
 Worm   575 VAMNFQTAGEELDLNAGLFRINGNCGYVLKPSCL--------------LDGVDPRSMAKPKLKLG 625

  Fly   690 VKVIAGQFLSDKKVG-----TYVEVDMFGLPSDTVKKEFRTRLVANNGLNPVYNEDPFVFRKVVL 749
            :.:.:.|:|...:.|     .||.|.:||:|.|..|.  :||::.:||.||.: .|.|.| .:..
 Worm   626 IGLFSAQYLPKSEPGKEIIDPYVSVQIFGIPRDETKA--KTRIIKDNGFNPEW-RDNFYF-TLSC 686

  Fly   750 PDLAVLRFGVYE----ESGKILGQRILPLDGLQAGYRHVSLRTEANFPMS-LPMLFVNIELK 806
            |:||::||.|.:    .|...:|:..:|:..|:.|:..:.|.|.....:. ...|||.|.::
 Worm   687 PELAIIRFCVKDFDSTSSNDFVGEFSIPVMSLRTGFSQIQLNTGYQHTLDPSASLFVRIAME 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
norpANP_001014720.1 PH_PLC_beta 17..149 CDD:270167 31/148 (21%)
PLN02952 224..786 CDD:178538 170/580 (29%)
EF-hand_like 227..318 CDD:286375 17/92 (18%)
PI-PLCc_beta 318..653 CDD:176533 110/335 (33%)
C2_PLC_like 689..806 CDD:175974 37/126 (29%)
DUF1154 866..908 CDD:284131
Mer2 <887..1003 CDD:286200
plc-4NP_501213.1 PH-like 29..145 CDD:302622 27/138 (20%)
EF-hand_7 161..223 CDD:290234 7/66 (11%)
EF-hand_10 176..226 CDD:291454 5/54 (9%)
PLN02228 221..751 CDD:177873 176/610 (29%)
EF-hand_like 231..315 CDD:286375 17/92 (18%)
PI-PLCc_eukaryota 315..596 CDD:176501 110/335 (33%)
C2_PLC_like 621..748 CDD:175974 37/130 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368239at2759
OrthoFinder 1 1.000 - - FOG0000126
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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