DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12693 and CG5050

DIOPT Version :10

Sequence 1:NP_572161.1 Gene:CG12693 / 31375 FlyBaseID:FBgn0029705 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_609839.2 Gene:CG5050 / 35048 FlyBaseID:FBgn0032637 Length:327 Species:Drosophila melanogaster


Alignment Length:253 Identity:51/253 - (20%)
Similarity:110/253 - (43%) Gaps:49/253 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 AIRFFNILLAKCWRRRTAEVNDLHTLVRKYQAHAVRTQTELLTRNQMICTQQRRGQLLNNQL--- 202
            :::.|.:::...||:|..||.:|..:|:..|..:::|:.||.....::..:::|.:.|..:|   
  Fly    39 SMKLFTMVVLHSWRQRRKEVRELKEMVQHLQDSSMKTKNELHVCGTLMRVEEKRNRELQIKLKLS 103

  Fly   203 LQAIDRLRVAMQNCTELDTELKQLREREVALNNKLASKSLECEYIDEMLNNFRSDMFHQLANYRE 267
            ..:||::|   .:|..|...::.|...:..|...|..:..|...::|:.:..:..:|........
  Fly   104 TMSIDQVR---SSCESLVNSVRDLTTEKRRLETDLEQRLQEYNELEEVSDKTKRLLFSAYVEQSS 165

  Fly   268 GAAELAKQQRRALQLEYENADLEDALLTMKDKFLMQNDQMSVALGEKQRKLDAAYETLRYYEQEL 332
            ...:||::||...:|:.|           ||:.:.:     |.|.|.:   |..|..:|.:.|.:
  Fly   166 LQKQLAEEQRTTQRLQAE-----------KDQLIQE-----VILAEGR---DNKYRQVREWYQRV 211

  Fly   333 IH---------------LEIRYRETLSQTGLEVE--------LQKEVSSLKEKMSFTR 367
            :|               ||.:..:....|| |:|        :..|::.|:::::..|
  Fly   212 LHKKEVCIYNLGRRLHMLEEQLFDINEHTG-ELEQLRESAQQMSNEITELRQEINRNR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12693NP_572161.1 PLN02939 186..>333 CDD:215507 29/149 (19%)
CG5050NP_609839.2 SMC_prok_B <57..>269 CDD:274008 47/235 (20%)

Return to query results.
Submit another query.