DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc4B and AT2G40070

DIOPT Version :9

Sequence 1:NP_001284856.1 Gene:Muc4B / 31368 FlyBaseID:FBgn0052774 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_181536.3 Gene:AT2G40070 / 818595 AraportID:AT2G40070 Length:607 Species:Arabidopsis thaliana


Alignment Length:499 Identity:122/499 - (24%)
Similarity:199/499 - (39%) Gaps:156/499 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LQSANGTS--------------------LNNE--------TITINISEIIAAAEAASNTTESSST 75
            |.|.:|||                    ||:|        .:|...:.:..:.|..|:.|..|.|
plant    64 LGSKHGTSPVFNISSGAPPSRKAAPDDFLNSEGDKNDYEWLLTPPGTPLFPSLEMESHRTMMSQT 128

  Fly    76 ----TAPLSTTTEATSTSTASSA----TSTTVPASTTLTSSSTTQAGITTS----TETSTSAQST 128
                :.|.:.|:...::||.|:|    ||....:|..|:|||......::|    :..:|....:
plant   129 GDSKSRPATLTSRLANSSTESAARNHLTSRQQTSSPGLSSSSGASRRPSSSGGPGSRPATPTGRS 193

  Fly   129 STILADT-STTPNTPTITTETSQSTVTQAPTTLQPSIT---TTQASTTTQLP---TTSTSITITT 186
            ||:.|:: |:.|:||     ||::||:.|   .:||:|   :|.::||...|   :||.|.:..|
plant   194 STLTANSKSSRPSTP-----TSRATVSSA---TRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLT 250

  Fly   187 TQASTTTTQTSTAAPSTTTTPPSTTSTTQAPTTTTLVQASTTTTLQPTTSTTPQSTSTTSTQAPT 251
            ..||..||.|:.:|.|.|.:.|||                ||.:..|:.||||.|.||..:..||
plant   251 PTASKPTTSTARSAGSVTRSTPST----------------TTKSAGPSRSTTPLSRSTARSSTPT 299

  Fly   252 TTTTQSTSTATQPSTTTPQSPPTTTTQVSTTSTQPTTT----TTPLPTTTTTPLPTTTTTPLPTT 312
            :..|...| .|...::||...|..:...:||:..||.:    ::|.|   ..|:||.:..|..:.
plant   300 SRPTLPPS-KTISRSSTPTRRPIASASAATTTANPTISQIKPSSPAP---AKPMPTPSKNPALSR 360

  Fly   313 TTTPLPTTTSTP-QPT-----TTTTPQPTTTTVPTTTTTTTQASTTSQSEITTTPAPTSSTEIGT 371
            ..:  ||..|.| :|:     :..||....||:|....:.|:...                  |.
plant   361 AAS--PTVRSRPWKPSDMPGFSLETPPNLRTTLPERPLSATRGRP------------------GA 405

  Fly   372 TTTTAGSTTTSTTTTSTTPIAYTVYTMEPYPNIYGRSNEIAKPQRKLRKGRKGRRGRRPRRRT-T 435
            .::.:||                   :||                      .|..|.||||:: :
plant   406 PSSRSGS-------------------VEP----------------------GGPPGGRPRRQSCS 429

  Fly   436 P----APLTSSTTTTTTTTVRTTLSGFDDFSEDYDDLVLNSNNV 475
            |    ||:.||     .::|.....|:...|::...:::.:..|
plant   430 PSRGRAPMYSS-----GSSVPAVNRGYSKASDNVSPVMMGTKMV 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc4BNP_001284856.1 None
AT2G40070NP_181536.3 CpxP_like 13..>59 CDD:412921
PHA03247 <179..436 CDD:223021 87/345 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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