DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15570 and grl-4

DIOPT Version :10

Sequence 1:NP_572154.1 Gene:CG15570 / 31366 FlyBaseID:FBgn0029697 Length:1357 Species:Drosophila melanogaster
Sequence 2:NP_001370386.1 Gene:grl-4 / 3564844 WormBaseID:WBGene00001713 Length:210 Species:Caenorhabditis elegans


Alignment Length:115 Identity:38/115 - (33%)
Similarity:47/115 - (40%) Gaps:27/115 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1248 PTETPTYG-------PPTNEPPTNQPPTNQPPTVQPPTNQPPTNQPPTNQPPTNQPPTNQPPTNQ 1305
            |..:.|:|       ||...||   ||...||.:..|   ||...||...||   ||...||   
 Worm    13 PIASSTFGGCCSMGPPPCPPPP---PPMCAPPPLPCP---PPPICPPQFCPP---PPMCPPP--- 65

  Fly  1306 PPTNQPPTNEPPTNRPPSPSPNNCYRRYC-----RKWRTRPSYLCYKNCG 1350
            ||...||...||.  ||.||.:.| :.|.     .::..:|:..|...||
 Worm    66 PPPPPPPMCPPPP--PPMPSYSPC-QSYAPAPVFNQYAMQPANDCCCRCG 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15570NP_572154.1 FhaB <413..1245 CDD:442443
PHA03247 <1216..1326 CDD:223021 31/84 (37%)
grl-4NP_001370386.1 Ground-like 137..207 CDD:461200
Blue background indicates that the domain is not in the aligned region.

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