DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and ush2a

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_009291422.1 Gene:ush2a / 568982 ZFINID:ZDB-GENE-060503-794 Length:5243 Species:Danio rerio


Alignment Length:1251 Identity:225/1251 - (17%)
Similarity:364/1251 - (29%) Gaps:526/1251 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EIYPKQEVQRKPVG-KPLILTCRPTVPEPSLVADLQWKDNRNNTILP------------------ 79
            |:..::|.....|| .||...|....|...|:.:    ..|.:|:.|                  
Zfish  3375 EVIDQEEQCCNGVGFNPLTSVCADRAPAGILIPE----KCRPSTVCPVSVAAGSFCGLCDFSPTQ 3435

  Fly    80 -----KPNGRNQPPMYTETLPGESLALMITSLSVEMGGKYYCTASYANTEILEKGVTIKTYVAIT 139
                 .|:|:     :.|..|..|.|....|:   :.....|.:|   .|::..||..:.    |
Zfish  3436 SICTWVPSGQ-----FPEHTPSSSAAAEAPSV---VAHSQLCPSS---EELIYSGVANRH----T 3485

  Fly   140 WTNA---PENQYP-------TLGQDYVVMCEVKAD---------PNPTIDWLRNG--DPIRTTND 183
            :|:.   |.:.|.       :.|:.:.|...|:.|         ||    |...|  |.|.....
Zfish  3486 FTDTELEPYSSYEYRVGVWNSFGRGFSVWTRVRTDEDVPYSVSPPN----WSHVGLRDDIIQLEW 3546

  Fly   184 KYVVQTNG-----LLIRNVQE---------SDEG--------IYTCRAAVIETGELLERTIRVEV 226
            ...::.||     :::|:.||         :|.|        ||..||..........:.:.|.|
Zfish  3547 SAPIKPNGEISHYVILRDGQERYRGTDHSFTDAGGIRPFQEYIYQLRACTSAGCTDSTKVVAVTV 3611

  Fly   227 FIQPEIISLPTNLEAVEGKPFAANCTARGKPVPEISWIRDATQLNVATADRFQVNPQTGLVTISS 291
            ..:||.|..|.             ..|.|.....:||  |...........:::| |||:     
Zfish  3612 QGEPEGIGAPV-------------VRALGPGALRVSW--DPPDKANGVIKEYRIN-QTGV----- 3655

  Fly   292 VSQDDYGTYTCLAKNRAGVVDQKTKLNVLVRPQIYELYNVTGARTKE----IAITCRAKG----- 347
                             ||:...|: .|:.       |||||.:...    |.:.|.|.|     
Zfish  3656 -----------------GVIHTHTE-GVMA-------YNVTGLQPHTNYSFIVMACTAAGCGASQ 3695

  Fly   348 -------RPAPA----------------------------------------ITFRRWGTQEEYT 365
                   ..|||                                        :.|...|.:..||
Zfish  3696 PSMGQTMEDAPAGVWSMPRHIQLNSSAVELHWSDPLKLNGLLSGYRLLRDGELVFTADGGKMSYT 3760

  Fly   366 NGQQDDDPRIILEPN----FDEERGESTGTLR---------ISNAER------------------ 399
            :..        |:||    ::.|.....|:.|         ||:.||                  
Zfish  3761 DAG--------LQPNTRYVYELEATTGGGSSRSDRYVIQTPISSPERIPPPYNVSLHGPRSVFVA 3817

  Fly   400 -SDDGLYQC-----------------IARN---------KGADAYKTGHITVEF----------- 426
             |..|:|..                 :.|:         :|.|.|...|:.|:.           
Zfish  3818 WSPPGVYNLSFPLEYNILLNAGTERPLIRSAGLEQFLLLQGLDPYTIYHVQVQACQPDGCGVGQG 3882

  Fly   427 ----APDFSHMKELPPVFSWEQRKANLSCLAMGIPNATIEWHWNGRKIKDLYDTNLKIV--GTGP 485
                .|:.:.:.:.|||.:           |.|.  |.||..|:.....:...||..|.  ..|.
Zfish  3883 VTVRTPEAAPIAQDPPVTT-----------ATGA--AVIEVRWSPPHKPNGIITNYFIYRRPAGT 3934

  Fly   486 RSDLIV-----------------HPVTRQYYSGYKCIATNIHGTAE---HDMQLKEARVPDFVSE 530
            :.:|:|                 ||.| :|  .|:..|.|..|:|.   ..::..||. |..::.
Zfish  3935 QEELLVFIWTEGPLEFIDASDSLHPFT-EY--EYRVAAVNSKGSASSSWSSIRTLEAE-PQGMNA 3995

  Fly   531 AKPSQLTATTMTFDIRGPSTELGLPILAYSVQYKE-----ALNPDWSTAYNRSWSPDSPYIVEGL 590
            ......:|.::......|:...|: ||.|.|.|::     ..|....||.....:....|:. ||
Zfish  3996 PSAHPTSAYSLLLSWTQPNAPNGV-ILVYKVVYQKPPSDPTFNSTTVTALTVLGNVFQAYVF-GL 4058

  Fly   591 RPQTEYSFRFAARN---QV---------------GLGNWGVNQQQ-------------------- 617
            .|.|.|:.|..|.|   ||               ||.|:.|.:::                    
Zfish  4059 EPYTTYNIRVEAVNGAGQVSSPWTTIRTLEASPSGLANFSVERREHGRALLLQWAEPASPNGVIK 4123

  Fly   618 --------------------------------------------STPRRSAPEEPKPLHNPVQHD 638
                                                        |.|:|...||..|...|.   
Zfish  4124 MYNIFNEDNLEFSGLARQFLFRRLEPYTVYTLILEACTEAGCTRSAPQRVTTEEAIPSSQPA--- 4185

  Fly   639 KEEPVVVSPYSDHFELRWGVPADNGEPIDRYQIKYCPGVKI-SGTWTELENSCNTVEVM------ 696
               |.|...:|...||.|..||.....|.:||:.   .|:: .|.....|:.....:::      
Zfish  4186 ---PTVYQVHSRSVELFWSPPAQPNGRILQYQLL---AVRLEDGRVRSDEDDSLRAKIVFIQNNT 4244

  Fly   697 --ETTSFEMTQLVGNTYYRIELKAHNAIGYSSPASIIMKT----TRG-----IDVIQVAERQVFS 750
              .:.|:.|:.|:..:.|:..::..||.|::....:.::|    .||     :..|:....:|| 
Zfish  4245 QANSFSYNMSGLLPWSRYKFRVRVSNAAGFTDSPWLTVQTKQAPPRGLAPPSVSHIEGKPNEVF- 4308

  Fly   751 SAAIVGIAIGGVLLLLFV--------------------VDLLCCITVHMGVMA-----------T 784
            .|....:...||||...:                    |||.........::|           |
Zfish  4309 VAWTPPLEPNGVLLTYRIQRDNIGFHFSFDSSVFNYTDVDLNAYTLYSYAIIACTVAGCVTSGPT 4373

  Fly   785 MCRKAKRSPSEID-----DEAKLGSLYGWRFPLPYCSGQLV------------------------ 820
            ..|..:.:|:.:|     |.........|..| .:.:|::|                        
Zfish  4374 QIRTLEGAPATVDSPILSDITSYSLNVSWTVP-SFQNGEIVVYILKVNNDEVYRGKRLSVQVLDL 4437

  Fly   821 ----------------------------KEPPPSPLPLPPPVKLGGSPMSTPLDEKEPLRTPTG- 856
                                        :|.|||.:| .|.:|:.| |.|..:..:||:. |.| 
Zfish  4438 QPHVSYSIILTACTNGGCTSSSPILIQTREAPPSGMP-APTLKVTG-PESVEVTWREPVH-PNGV 4499

  Fly   857 ----SIKQNSTIEFDG 868
                .:::|.::.:.|
Zfish  4500 IMGYELRRNGSLIYTG 4515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 23/117 (20%)
IG_like 144..226 CDD:214653 24/121 (20%)
IGc2 152..209 CDD:197706 19/89 (21%)
I-set 230..319 CDD:254352 16/88 (18%)
IGc2 243..309 CDD:197706 9/65 (14%)
IG_like 330..424 CDD:214653 33/207 (16%)
IGc2 339..412 CDD:197706 25/182 (14%)
Ig 447..518 CDD:143165 21/92 (23%)
fn3 534..611 CDD:278470 24/99 (24%)
FN3 640..735 CDD:238020 22/107 (21%)
ush2aXP_009291422.1 Laminin_G_3 160..297 CDD:290121
Laminin_N 307..528 CDD:295486
EGF_Lam 529..577 CDD:238012
EGF_Lam 586..638 CDD:238012
Laminin_EGF 653..703 CDD:278482
Laminin_EGF 706..756 CDD:278482
EGF_Lam 759..797 CDD:214543
Laminin_EGF 808..857 CDD:278482
EGF_Lam 859..912 CDD:238012
EGF_Lam 913..963 CDD:238012
EGF_Lam 965..1014 CDD:238012
EGF_Lam 1015..1064 CDD:238012
FN3 1177..1253 CDD:238020
FN3 1264..1375 CDD:238020
FN3 1386..1469 CDD:214495
LamG 1537..1699 CDD:238058
LamG 1737..1890 CDD:238058
FN3 1981..2071 CDD:238020
FN3 2163..2253 CDD:238020
FN3 2258..2341 CDD:238020
FN3 2352..2443 CDD:238020
FN3 2447..2544 CDD:238020
FN3 2547..2633 CDD:238020
FN3 2635..2733 CDD:238020
FN3 2743..2807 CDD:238020
FN3 2830..2932 CDD:238020
fn3 2939..3014 CDD:278470
FN3 3032..>3099 CDD:238020
FN3 3542..3611 CDD:238020 12/68 (18%)
FN3 3615..3701 CDD:238020 26/131 (20%)
fn3 3718..3784 CDD:278470 9/73 (12%)
FN3 3801..3887 CDD:238020 9/85 (11%)
FN3 3908..3971 CDD:238020 15/65 (23%)
FN3 3996..4086 CDD:238020 22/91 (24%)
FN3 4186..4284 CDD:238020 21/100 (21%)
fn3 4288..4366 CDD:278470 14/78 (18%)
FN3 4382..4465 CDD:238020 7/83 (8%)
FN3 4470..4553 CDD:238020 14/49 (29%)
FN3 4555..4653 CDD:238020
FN3 4679..4753 CDD:238020
fn3 4760..4830 CDD:278470
FN3 4864..4955 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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