DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and lrit3a

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:620 Identity:126/620 - (20%)
Similarity:197/620 - (31%) Gaps:219/620 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TLPGESLALM------------ITSLSVEMGGKYYCTASYANTEILEKGVTIKTYVAITWTNAPE 145
            |.|.|||..|            :||:.||       .|.|              .:.||:.:...
Zfish   119 TFPWESLKEMPSLKTLDLHNNRLTSVPVE-------AAPY--------------LINITYLDISS 162

  Fly   146 NQYPTLGQDYVVMCEVKADPNPTIDWLRNGDPIRTTNDKYVVQTNGL----------LIRNVQES 200
            |:..||..|.|       |..|....::   |...|:.|.|:   ||          :.:.::.|
Zfish   163 NKLTTLPSDLV-------DIWPPFSGIQ---PSANTSQKTVL---GLQDNPWYCDCRISKLIELS 214

  Fly   201 D---------EGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAVEGKPFAANCTARGK 256
            .         :.:.||......:|.|.:|. .::..::|.:::..|.:.:..|......|.|.|.
Zfish   215 KMAGIPVVLMDQVLTCSGPEHLSGVLFQRA-ELDQC
VKPTVMTSATKITSPLGSNVLLRCDANGF 278

  Fly   257 PVPEISWIRDATQLNVATADRFQVN-------PQTG----LVTISSVSQDDYGTYTCLAKNRAGV 310
            |.|.:.|         .|||...||       |..|    ::::.|:...|.|.|.|.|||.||.
Zfish   279 PTPTLLW---------TTADGSVVNNTVVQESPGEGVRWSILSLHSIVFKDAGDYRCKAKNVAGN 334

  Fly   311 VD----------QKT----KLNVLVRPQIYELYNVTGARTK--------EIAITCRAKGRPAPAI 353
            .:          |.|    .:|:..:|:  :....|...||        .|.||.|......|.:
Zfish   335 AEAYITLSV
DGVQPTTPFPPINITKQPE--DQPTTTFTPTKMPLFTSLSPITITTRPVMTTMPPL 397

  Fly   354 TFRR-----WGTQEEYTNGQQDDDPRIILEPNFDEERGESTGTLRISNAERSDDGLYQCIARNKG 413
            |.|:     .|.|.....|   |.|                     :..::|.:|          
Zfish   398 TTRKSPIPGGGVQRSPPAG---DKP---------------------AKVQQSKNG---------- 428

  Fly   414 ADAYKTGHITVEFAPDFSHMKEL--PPVFSWEQRKANLSCLAMGIPNAT----IEWHWNGRKIKD 472
                 .|.|......|...::|.  ..|..|.         |.|:|:.|    :.:.::.:..|:
Zfish   429 -----KGSIKKSDIRDIEVVEETTETAVLLWS---------AEGLPSDTPLTVVYFPYDAKDDKE 479

  Fly   473 LYDTNLKIVGTGPRSDLIVHPVTRQYYSGYKCIATNIHGTAEHDMQLKEARVPDFVSEAKPSQLT 537
            ..||.   ||.|..  |:.:.:..|.|:  .|:.|...|        ||..| ||          
Zfish   480 TVDTE---VGQGKL--LLEYLMPNQVYT--VCLVTKSSG--------KEQCV-DF---------- 518

  Fly   538 ATTMTFDIRGPSTELGLPILAYSVQYKEALNPDWSTAY-----------NRSWSPDSPYIVEGLR 591
               .|.:|.|...:..:.::|.::....|:.......|           :|:..||     |.|.
Zfish   519 ---STLEIGGEEGQNKVLMIASAIACAIAVPLIVVLLYKILCLYCKGNSSRNNGPD-----EDLS 575

  Fly   592 PQTEYSFRFAARNQVGLGN-----WGVNQQQSTPR 621
            ..|...|......|..|..     |...|.|.:.|
Zfish   576 KDTYVKFETLTMKQRTLNGQANDLWARRQTQESER 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 12/51 (24%)
IG_like 144..226 CDD:214653 19/100 (19%)
IGc2 152..209 CDD:197706 13/75 (17%)
I-set 230..319 CDD:254352 28/113 (25%)
IGc2 243..309 CDD:197706 22/76 (29%)
IG_like 330..424 CDD:214653 19/106 (18%)
IGc2 339..412 CDD:197706 14/77 (18%)
Ig 447..518 CDD:143165 16/74 (22%)
fn3 534..611 CDD:278470 15/92 (16%)
FN3 640..735 CDD:238020
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566 6/21 (29%)
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563 8/25 (32%)
leucine-rich repeat 107..130 CDD:275378 6/10 (60%)
LRR_8 129..>171 CDD:290566 11/62 (18%)
LRR_4 129..170 CDD:289563 11/61 (18%)
leucine-rich repeat 131..154 CDD:275378 6/43 (14%)
leucine-rich repeat 155..168 CDD:275378 3/12 (25%)
TPKR_C2 199..249 CDD:301599 6/50 (12%)
Ig 252..343 CDD:299845 26/99 (26%)
IG_like 261..343 CDD:214653 24/90 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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