DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and negr1

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:325 Identity:79/325 - (24%)
Similarity:128/325 - (39%) Gaps:61/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 SWIRDATQLNVATADRFQVNPQTGLVT-----------ISSVSQDDYGTYTCLAKNRAGVVDQKT 315
            :|: :.:.:..|..|::..:|:..:|:           |..|...|.|.|||..::...:..:..
Zfish    69 AWL-NRSSIIYAGNDKWSGDPRVSIVSNVGDKHEYSLQIQKVDVTDEGVYTCSIQSERNLHPKLI 132

  Fly   316 KLNVLVRPQIYEL-YNVTGARTKEIAITCRAKGRPAPAITFRRWGTQEEYTNGQQDDDPRIILEP 379
            :|.|.|.|:||:: .::|......:::.|.|.|:|.|.|::|.                   :.|
Zfish   133 QLIV
KVPPKIYDISSDITVNEGSNVSLICAASGKPEPKISWRH-------------------ISP 178

  Fly   380 NFDEERGESTGTLRISNAERSDDGLYQCIARNKGADA-YKTGHITVEFAPDFSHMKE--LPPVFS 441
            :  ..:.||...|.|:...|...|.|:|.|.|..|.. .||..:||.|.|....||.  :.|   
Zfish   179 S--ARKYESGEYLNITGISRDQAGDYECGAENDIASPDTKTVRVTVNFPPAIHEMKSHGVRP--- 238

  Fly   442 WEQRKANLSCLAMGIPNATIEWHWNGRKIKDLYDTNLKIVGTGPRSDLIVHPVTRQYYSGYKCIA 506
              .:.|.|.|.|..:|:...||:...::|.  ....:.|.....||.|.|..:|:..|..|.|:|
Zfish   239 --GQVALLRCEAAAVPSPVFEWYKGEKRIN--MGQGIVINNLSSRSVLTVKNMTQDRYGNYTCVA 299

  Fly   507 TNIHGTAEHDMQLKEARVPDFVSEAKPSQLTATTMTFDIRGPSTELGLPILAYSVQYKEALNPDW 571
            .|..|||...:.|.....|              |.|..:..|::.   |.:..|....|.|...|
Zfish   300 VNRLGTANASVPLNPIIEP--------------TTTSAVSSPASN---PAMYGSTGGAEVLLACW 347

  Fly   572  571
            Zfish   348  347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653
IG_like 144..226 CDD:214653
IGc2 152..209 CDD:197706
I-set 230..319 CDD:254352 13/67 (19%)
IGc2 243..309 CDD:197706 12/57 (21%)
IG_like 330..424 CDD:214653 22/94 (23%)
IGc2 339..412 CDD:197706 17/72 (24%)
Ig 447..518 CDD:143165 22/70 (31%)
fn3 534..611 CDD:278470 8/38 (21%)
FN3 640..735 CDD:238020
negr1XP_009300786.1 Ig 42..121 CDD:299845 12/52 (23%)
IG_like 44..136 CDD:214653 13/67 (19%)
I-set 140..222 CDD:254352 25/102 (25%)
IGc2 153..208 CDD:197706 17/75 (23%)
IG_like 236..312 CDD:214653 23/82 (28%)
IGc2 238..304 CDD:197706 20/72 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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