DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and Ama

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_731114.2 Gene:Ama / 40831 FlyBaseID:FBgn0000071 Length:341 Species:Drosophila melanogaster


Alignment Length:342 Identity:90/342 - (26%)
Similarity:141/342 - (41%) Gaps:36/342 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PNSVGVFLALLLCSCSLIELTRAQS-PILEIYPKQEVQRKPVGKPLILTCRPTVPEPSLVADLQW 69
            |:...:.|.:.|..|..|.|....| |::....|..|  ..||..:...|  ||.|...:: :.|
  Fly     7 PDMARLRLLIGLIFCLAISLDSVLSAPVISQISKDVV--ASVGDSVEFNC--TVEEVGQLS-VSW 66

  Fly    70 -----KDNRNNTILPKPNGRNQPPM-YTETL-----PGESL-ALMITSLSVEMGGKYYCTASYAN 122
                 :.:.|:.:|...|..:.|.. |..|:     .|.:: ...|.::.|...|.|.|....:.
  Fly    67 AKRPSESDTNSVVLSMRNILSLPDQRYNVTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQVLVSA 131

  Fly   123 TEILEK--GVTIKTYVAITWTNAPENQYPTLGQDYVVMCEVKADPNPTIDWLRNGDPIRTTNDKY 185
            ||.:.|  .:.|||...|. .|.|::...|.||:..:.|.....|.|||.|.|..:.:.......
  Fly   132 TEKVTKKLSLQIKTPPVIA-ENTPKSTLVTEGQNLELTCHANGFPKPTISWAREHNAVMPAGGHL 195

  Fly   186 VVQTNGLLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAVEGKPFAAN 250
            :.:.. |.||:|...|.|.|.|.|...| |:..:|.|||||..:|:|......:..:........
  Fly   196 LAEPT-LRIRSVHRMDRGGYYCIAQNGE-GQPDKRLIRVEVEFRPQIAVQRPKIAQMVSHSAELE 258

  Fly   251 CTARGKPVPEISWIRDATQL---------NVATADRFQVNPQTGLVTISSVSQDDYGTYTCLAKN 306
            |:.:|.|.|.:.|.::...|         |.|::.    ...|.::.|.||.::|:|.|.|.|.|
  Fly   259 CSVQGYPAPTVVWHKNGVPLQSSRHHEVANTASSS----GTTTSVLRIDSVGEEDFGDYYCNATN 319

  Fly   307 RAGVVDQKTKLNVLVRP 323
            :.|..|.:..|...|.|
  Fly   320 KLGHADARLHLFQTVIP 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 23/107 (21%)
IG_like 144..226 CDD:214653 26/81 (32%)
IGc2 152..209 CDD:197706 17/56 (30%)
I-set 230..319 CDD:254352 23/97 (24%)
IGc2 243..309 CDD:197706 18/74 (24%)
IG_like 330..424 CDD:214653
IGc2 339..412 CDD:197706
Ig 447..518 CDD:143165
fn3 534..611 CDD:278470
FN3 640..735 CDD:238020
AmaNP_731114.2 I-set 33..143 CDD:254352 25/114 (22%)
Ig 37..127 CDD:299845 21/94 (22%)
IG_like 154..234 CDD:214653 26/81 (32%)
IGc2 161..223 CDD:197706 19/63 (30%)
I-set 254..330 CDD:254352 20/79 (25%)
IGc2 254..322 CDD:197706 18/71 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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