DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fas2 and DIP-theta

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_723103.1 Gene:DIP-theta / 33795 FlyBaseID:FBgn0051646 Length:606 Species:Drosophila melanogaster


Alignment Length:508 Identity:127/508 - (25%)
Similarity:199/508 - (39%) Gaps:117/508 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 TWTNA-PENQYPTLGQ-----------DYVVMCEVKADPNPTIDWLRNGDPIRTTNDKYVVQTNG 191
            |..|| ||...|..|:           :.|:.|.|.......|.|||.......|...:|:..|.
  Fly   119 TVVNAIPEKDLPKFGELLQNVTVPVSREAVLQCVVDNLQTYKIAWLRVDTQTILTIQNHVITKNH 183

  Fly   192 -------------LLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAV- 242
                         |.||:|:|||:|.|.|:   |.|..:..:...::|.:.|:|:..||:.:.| 
  Fly   184 RMSITHAEKRAWILRIRDVKESDKGWYMCQ---INTDPMKSQVGYLDVVVPPDILDYPTSTDMVI 245

  Fly   243 -EGKPFAANCTARGKPVPEISWIRDATQL----NVATADRFQVNPQTGLVTISSVSQDDYGTYTC 302
             ||......|.|.|.|.|.|:|.|:..:|    |.|.|    |......:||:.|::.:.|.|.|
  Fly   246 REGSNVTLKCAATGSPTPTITWRREGGELIPLPNGAEA----VAYNGSFLTIAKVNRLNMGAYLC 306

  Fly   303 LAKNRAGV---VDQKTKLNVLVRPQIYELYNVTGAR-TKEIAITCRAKGRPAPAITFRRWGTQEE 363
            :|.|  |:   |.::..|.|...|.|:....:.||. |:.|.:.|:::..|.   :...|     
  Fly   307 IASN--GIPPTVSKRVMLIVHFPPMIWIQNQLVGAALTQNITLECQSEAYPK---SINYW----- 361

  Fly   364 YTNGQQDDDPRIILEPNFDEERGES----TGTLRISNAERSDDGLYQCIARNKGAD---AYKTGH 421
                 ..:|..|:....|..|..||    |..|.|...:..|.|.|:|:|:|...|   |.|..|
  Fly   362 -----MKNDTIIVPGERFVPETFESGYKITMRLTIYEVDIQDFGAYRCVAKNSLGDTDGAIKLYH 421

  Fly   422 I-----TVEFAPDFSHMKELPPV---FSWEQR-----KANLSCLAMGIP----------NATIEW 463
            |     ....||..| :..:|.|   ::.|||     .:|.:      |          |..::.
  Fly   422 IPQTTTMTTMAPTVS-INTVPVVLVKYNKEQRYGSSQNSNTN------PYNFNPGNSQQNTKLQR 479

  Fly   464 HWNGRKIKDLYDTNLKIVGTGPRSDLIVHPVTRQYYSGYKCIAT-----NIHGTAEHDMQLKEAR 523
            ..:..|..|...:.|..|..|..|.|.   .::.::|.....::     ..|...:|..|.::..
  Fly   480 GKSNSKGSDQSPSGLNNVFVGATSSLW---NSQDHHSSSSSSSSASSRGRDHHQQQHHQQQQQNH 541

  Fly   524 VPD----FVSEAKPSQLT---ATTMT------FDIRGPSTELG--LPILAYSV 561
            ..|    :.|:.|...||   |.::|      .|::|.::.|.  .|||..|:
  Fly   542 GSDHGASYRSDGKSPHLTNHDAKSLTDDLDRMQDLKGWASRLSPISPILGLSM 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653
IG_like 144..226 CDD:214653 26/105 (25%)
IGc2 152..209 CDD:197706 21/80 (26%)
I-set 230..319 CDD:254352 31/97 (32%)
IGc2 243..309 CDD:197706 23/69 (33%)
IG_like 330..424 CDD:214653 27/106 (25%)
IGc2 339..412 CDD:197706 18/76 (24%)
Ig 447..518 CDD:143165 13/85 (15%)
fn3 534..611 CDD:278470 11/39 (28%)
FN3 640..735 CDD:238020
DIP-thetaNP_723103.1 Ig 137..230 CDD:299845 23/95 (24%)
IG_like 137..230 CDD:214653 23/95 (24%)
IG_like 240..324 CDD:214653 27/89 (30%)
IGc2 247..310 CDD:197706 22/66 (33%)
Ig 327..419 CDD:299845 26/104 (25%)
IG_like 343..420 CDD:214653 22/89 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.