DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and fipi

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_787975.1 Gene:fipi / 33676 FlyBaseID:FBgn0031627 Length:450 Species:Drosophila melanogaster


Alignment Length:456 Identity:104/456 - (22%)
Similarity:191/456 - (41%) Gaps:74/456 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LEIYPKQEVQRKPVGKPLILTCRPTVPEPSLVADLQWKDNRNNTILPKPNGRNQPPMYTETLPGE 97
            |.:.|.:....:...:.||:.||.  |:|.:  :|.||..:.. |:.:..||    ::.|....|
  Fly    25 LSLSPAEHSVVRYTNESLIVQCRS--PDPKV--ELHWKSPKGE-IIREHKGR----IHIEQTSTE 80

  Fly    98 SLALMITSLSVEMGGKYYCTASYANTEILEKGVTIKTYVAITWTNAPENQYPTLGQDYVVMCEVK 162
            .|.::...:::...|.:.|.|  |:..:..|...:..|..||:|..........|:...::||||
  Fly    81 QLKIVFAHIALADKGNWSCEA--ADGSLHSKSFDLIVYQKITFTENATVMTVKEGEKATILCEVK 143

  Fly   163 ADPNPTIDWLRNGDPI---RTTNDKYVVQTNGLLIRNVQESDEGIYTCRAAVIET--GELLERTI 222
            .:|.|.:.|..||.||   ...:.|:.:..:||||..|.::|.|.|.|||..:.:  .::.|||:
  Fly   144 GEPQPNVTWHFNGQPISAGAADDSKFRILADGLLINKVTQNDTGEYACRAYQVNSIASDMQERTV 208

  Fly   223 RVEVFIQP-----EIISLPTNLEAVEGKPFAANCTARGKPVPEISWIRDATQLNVATADR---FQ 279
            .:::..:|     ..:||  ....:.|.. ...|.|..:|....:|.|...:|:  :.:|   .|
  Fly   209 LMKIEHKPIWSKTPFVSL--KYAYINGTA-TLMCEALAEPPANFTWYRKHNKLH--SNNRLYTIQ 268

  Fly   280 VNPQTGLVTISSVSQDDYGTYTCLAKNRAGVVDQKTKLNVLVRPQIYELYNVTGARTKEIAITCR 344
            .:.....:||..::...:..|.|.|:|..|.:::.|:|....:|.....:.:.|..:....:...
  Fly   269 SDSYWSSLTIHVLNTSAFDNYRCRARNDLGTIERTTRLEQGEKPPSPANFQLRGFNSNTFDVVLS 333

  Fly   345 A-KGRPAPAI---TFR-RWGTQEEY-------TNGQQDDDPRIILEPNFDEERGESTGTLRISNA 397
            | :|.|...:   .|| .:.|:.|:       ||.::.|         :..|.|   .|..::|.
  Fly   334 APRGPPDSPMGVNGFRIEYMTEMEFKTDAGKWTNARRKD---------YAFEEG---ATFLLTNL 386

  Fly   398 ERSDDGLYQCIARNKG-------ADAYKTGHITVEFAPDFSHMKELPPVFSWEQRKANLSCLAMG 455
            |.....|.:..:||..       .:.|||  :::|           |.|.|..:...|: |:.:|
  Fly   387 EPDTVYLVRAASRNLAGFSDFTKVEKYKT--LSLE-----------PRVSSGVKETRNM-CVELG 437

  Fly   456 I 456
            :
  Fly   438 V 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 20/93 (22%)
IG_like 144..226 CDD:214653 27/86 (31%)
IGc2 152..209 CDD:197706 22/59 (37%)
I-set 230..319 CDD:254352 21/96 (22%)
IGc2 243..309 CDD:197706 15/68 (22%)
IG_like 330..424 CDD:214653 22/112 (20%)
IGc2 339..412 CDD:197706 17/84 (20%)
Ig 447..518 CDD:143165 3/10 (30%)
fn3 534..611 CDD:278470
FN3 640..735 CDD:238020
fipiNP_787975.1 IG_like 33..115 CDD:214653 20/92 (22%)
I-set 128..202 CDD:254352 24/73 (33%)
Ig 133..>193 CDD:299845 22/59 (37%)
IG_like 228..307 CDD:214653 17/81 (21%)
Ig 235..305 CDD:143165 15/72 (21%)
FN3 312..415 CDD:238020 21/114 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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