DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fas2 and Lrit3

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:526 Identity:106/526 - (20%)
Similarity:192/526 - (36%) Gaps:163/526 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 TYVAITWTNAPENQYP----TLG-QDYVVMCEVKADPNPTIDWLRNGDPIRTTNDKYVVQTNGLL 193
            :::|:|.:.:|:  :|    .|| ||....|:...  :..|:       :....|..||..:.|:
Mouse   177 SHLAVTPSRSPD--FPPRRIILGLQDNPWFCDCHI--SKVIE-------LSKVTDHAVVLLDPLM 230

  Fly   194 IRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAVEGKPFAANCTARGKPV 258
            :.:..|..:||            |.:| :.:|..::|.::...|.:.:..|......|.|:|.|.
Mouse   231 VCSEPERFQGI------------LFQR-VELEKCLKPSVMMSATKITSALGSNVLLRCDAKGHPT 282

  Fly   259 PEISWIR-DATQLNVATADRFQVNPQTG----LVTISSVSQDDYGTYTCLAKNRAGVVDQKTKLN 318
            |:::|.| |.:.:|...   .|.:|..|    :::::|:|..|.|.|.|.|||.||:.:....:.
Mouse   283 PQLTWTRSDGSTVNYTV---IQESPGEGIRWSIISLTSISHKDAGDYRCKAKNLAGISEAVVTVT 344

  Fly   319 VLVRPQIYELYNVTGARTKEIA--ITCRAKGRPAPAITFRRWGTQEEYTNGQQDDDPRIILEPNF 381
            |:            |..|..::  .:.|:.|.|.                 :|...|.:      
Mouse   345 VV------------GGVTTTLSPDSSERSPGEPP-----------------EQHPQPGL------ 374

  Fly   382 DEERGESTGTLRISNAERSDDGLYQCIARNKGADAYKT---GHITVEFAPDFSHMKELPPVFSWE 443
                |.||.    .:......||       ..|.:|.|   ...|..::|..|   .|||:||..
Mouse   375 ----GGSTP----PSKSWLSPGL-------TSAPSYPTPSAALYTSTWSPPPS---SLPPIFSAA 421

  Fly   444 QRKANLSCLAM----------------GIPNATIEWHWNGRKIKDLYDTNLKIVGTGPRSDLIVH 492
            ....::.....                |..||.||  .||||...|        ....:.:|.: 
Mouse   422 SATTSVQTSISGRTARTSHQPPLLHPGGKSNAKIE--KNGRKFPPL--------SASKKEELAL- 475

  Fly   493 PVTRQYYSGYKCIATNIHGTAEHDMQLKEARVPDFVSEAKPSQLTATTMTFDIRGPSTELGLPIL 557
                          .:.....|.::.:|:.||      |:.:.::.|.| ::....:.|..:.:|
Mouse   476 --------------LDQAAPMETNVTIKDLRV------ARETGVSVTLM-WNSSSSTQESSVTVL 519

  Fly   558 AYSVQYKE----ALNPDWSTAYNRSWS------PDSPYIV----EGLRPQTEYSFRFAARNQVGL 608
             || :|.|    .:|.|   .|.::.:      |.|.|:.    :|:.|:.:....|:.....|.
Mouse   520 -YS-KYGEKDLLLVNAD---DYGKNQATINGLEPGSQYVACVCPKGVGPREDLCITFSTNRVEGR 579

  Fly   609 GN-WGV 613
            |: |.:
Mouse   580 GSQWSL 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653
IG_like 144..226 CDD:214653 17/86 (20%)
IGc2 152..209 CDD:197706 12/57 (21%)
I-set 230..319 CDD:254352 26/93 (28%)
IGc2 243..309 CDD:197706 22/70 (31%)
IG_like 330..424 CDD:214653 15/98 (15%)
IGc2 339..412 CDD:197706 10/74 (14%)
Ig 447..518 CDD:143165 12/86 (14%)
fn3 534..611 CDD:278470 19/91 (21%)
FN3 640..735 CDD:238020
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566
LRR_4 106..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563
LRR 4. /evidence=ECO:0000255 129..151
leucine-rich repeat 131..154 CDD:275378
LRR 5. /evidence=ECO:0000255 152..175
leucine-rich repeat 155..168 CDD:275378
Ig 254..335 CDD:299845 24/83 (29%)
IG_like 263..339 CDD:214653 24/78 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 11/78 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 9/40 (23%)
FN3 489..563 CDD:238020 19/85 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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