DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fas2 and Ptprq

DIOPT Version :9

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:951 Identity:203/951 - (21%)
Similarity:343/951 - (36%) Gaps:277/951 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 ETLPGESLALMITSLSV-----------EMGGK---YYCTASYANTEILEKGVTIKTYVAITWTN 142
            |:.||:.:.|.:.:|:.           :..||   :..:..:|.:.|:.|.|:||....:: ..
Mouse   153 ESAPGKVVNLTVEALNYSAVNLIWYLPRQPNGKITSFKISVKHARSGIVVKDVSIKVEDLLS-GK 216

  Fly   143 APENQYPTLGQDYVVMCEVKAD--------PNPTIDWLRNGDPIRTTNDKYVVQTN--------- 190
            .||             |...:|        |:||:.  |...|:|||:....:..|         
Mouse   217 LPE-------------CNENSDSFLWSTTSPSPTLS--RATPPLRTTHLSNTLARNKISSVWKEP 266

  Fly   191 -GLLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAVEGKPFAANC--- 251
             ..::.:::.....::...|...|.|           :|...|:..|.::.  ||.|  .||   
Mouse   267 ISFVVTHLRPYTTYLFEVSAVTTEAG-----------YIDSTIVRTPESVP--EGPP--QNCITG 316

  Fly   252 TARGKPVPEISWIRDATQLNVATAD---RFQVNPQTGLVTISSVSQ-----------DDYGTYTC 302
            ...||.. .|||...|    :.|..   |.::...||.:..:|...           ..|..|..
Mouse   317 NVTGKAF-SISWDPPA----IVTGKFSYRVELYGPTGRILDNSTKDLRFVFTHLTPFTMYDVYVA 376

  Fly   303 LAKNRAGVVDQKTKLNVLVRPQ----IYELYNVTGARTKEIAITCRAKGRPAPAITFRRWGT--- 360
             |:..|| |..|:.|:|...|.    :::| .:......||.::.|...:|...|:..|...   
Mouse   377 -AETSAG-VGPKSNLSVFTPPDVPGAVFDL-QIVEVEATEIRVSWRKPRQPNGIISQYRVKVSVL 438

  Fly   361 -------------QEEYTNGQQDDDPRIILEP--NFDEERGESTGTLR-----ISNAE------- 398
                         |:||.|.....:...:::|  .|.|..||.:..|.     |.|:.       
Mouse   439 ESGVILENTLLTGQDEYINNPMTPEIMNLVDPMIGFYEGSGEMSSDLHSLASFIYNSHPHDFPAR 503

  Fly   399 -RSDDGLYQCI--ARNKGADAYKTGHIT------VEFAPD------FSHMKELPP----VFSWEQ 444
             |.:|.....:  .||:........|::      |.|...      |:.|.|.||    |.:.||
Mouse   504 TRVEDQRSPVVVATRNQYMTDIAAEHLSYVIRRLVPFTEHTISVSAFTVMGEGPPTVLTVRTREQ 568

  Fly   445 RKANLSCL-AMGIPNATIEWHW------NGRKIK--DLY----DTNLKIVGTGPRSDLIVHPVTR 496
            ..:::..: ...|.:::|..:|      || ||.  .:|    |||.....|...:..::..:.:
Mouse   569 VPSSIQIINYKNISSSSILLYWDPPEYPNG-KITHYTIYAMELDTNRAFQMTTVDNSFLITGLKK 632

  Fly   497 QYYSGYKC-IATNIHG-----TAEHDMQLKEARVPDFVSEAKPSQLTATTMTFDIRGPSTELGLP 555
              |:.||. :|.:.|.     :.|:|:.:   |.|:...|:.|..:..|.::     || ||.|.
Mouse   633 --YTRYKMRVAASTHVGESSLSEENDLFV---RTPEDEPESSPQDVKVTDVS-----PS-ELSLT 686

  Fly   556 ----------ILAYSVQYKEALNPDWSTAYNRSWSPDSPYIVEGLRPQTEYSFRFAARNQVGLGN 610
                      |:||.|.|:   |.|.....|.|   .:...:..|:|.|.|:....:..::|.||
Mouse   687 WSPPEKPNGIIIAYEVFYQ---NADALFVKNTS---TTNITLSDLKPYTLYNISIQSYTRLGHGN 745

  Fly   611 -----WGVNQQQSTPRRSAPEEPKPLHNPVQHDKEEPVVVSPYSDHFELRWGVPADNGEPIDRYQ 670
                 ..|...::.| .||||  ...:..:..::.|...:.|.|.:     |:       |.:|.
Mouse   746 QSSSLLSVRTSETVP-DSAPE--NITYKNISSEEIEIFFLPPRSPN-----GI-------IQKYT 795

  Fly   671 IKYCPGVKISGTWTELENSCNTVEVMETTSFEMTQLVGN----TYYRIELKAHNAIG---YSSPA 728
            |           :.:..|| :....:||||..:|  :|.    |:|.||:.|....|   .|.|.
Mouse   796 I-----------YLKRSNS-HEARTIETTSLTLT--IGGLKKYTHYVIEVSASTLKGEGVRSMPI 846

  Fly   729 SIIMKTTRGIDVIQVAERQVFSSAAIVGIAI----------GGVLL--LLFVVDLLCCITVHMGV 781
            ||:.:     :....:..|.||...:.|:.:          .|::|  .::|.|.:...|::   
Mouse   847 SILTE-----EDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWDKVSLKTIN--- 903

  Fly   782 MATMCRKAKRSPSEIDDEAKLGSLY---GWRFPLPYCSGQLVKEPPPSPLPLPPP-----VKLGG 838
             ||   :.....|::|..|.. |.|   ..||........::....|...|..||     |.|..
Mouse   904 -AT---EVSLELSDLDYHADY-SAYVTASTRFGDGKTRSSVINFRTPEGEPSDPPKDVHYVNLSS 963

  Fly   839 SPMS---TPLDEKEPLRTPTGSIK------QNSTIEFDGRF 870
            |.:.   ||     |:: |.|.|:      ||::..|...|
Mouse   964 SSIILFWTP-----PVK-PNGIIQYYSVYYQNTSSTFVQNF 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 IG_like 39..133 CDD:214653 11/54 (20%)
IG_like 144..226 CDD:214653 16/99 (16%)
IGc2 152..209 CDD:197706 11/74 (15%)
I-set 230..319 CDD:254352 26/105 (25%)
IGc2 243..309 CDD:197706 19/82 (23%)
IG_like 330..424 CDD:214653 23/132 (17%)
IGc2 339..412 CDD:197706 20/105 (19%)
Ig 447..518 CDD:143165 19/89 (21%)
fn3 534..611 CDD:278470 22/91 (24%)
FN3 640..735 CDD:238020 25/101 (25%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020 24/93 (26%)
fn3 399..>441 CDD:365830 7/42 (17%)
FN3 570..654 CDD:238020 17/86 (20%)
fn3 668..744 CDD:365830 21/87 (24%)
FN3 762..850 CDD:238020 29/115 (25%)
fn3 857..934 CDD:365830 18/84 (21%)
FN3 951..1049 CDD:238020 15/54 (28%)
FN3 1056..1137 CDD:238020
FN3 1152..1233 CDD:238020
FN3 1247..1337 CDD:238020
FN3 1342..1421 CDD:238020
FN3 1432..1535 CDD:238020
FN3 1542..1638 CDD:238020
FN3 1645..1734 CDD:238020
UP_III_II 1759..1928 CDD:297589
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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