DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fas2 and Ptprq

DIOPT Version :10

Sequence 1:NP_001284854.1 Gene:Fas2 / 31364 FlyBaseID:FBgn0000635 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:951 Identity:203/951 - (21%)
Similarity:343/951 - (36%) Gaps:277/951 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 ETLPGESLALMITSLSV-----------EMGGK---YYCTASYANTEILEKGVTIKTYVAITWTN 142
            |:.||:.:.|.:.:|:.           :..||   :..:..:|.:.|:.|.|:||....:: ..
Mouse   153 ESAPGKVVNLTVEALNYSAVNLIWYLPRQPNGKITSFKISVKHARSGIVVKDVSIKVEDLLS-GK 216

  Fly   143 APENQYPTLGQDYVVMCEVKAD--------PNPTIDWLRNGDPIRTTNDKYVVQTN--------- 190
            .||             |...:|        |:||:.  |...|:|||:....:..|         
Mouse   217 LPE-------------CNENSDSFLWSTTSPSPTLS--RATPPLRTTHLSNTLARNKISSVWKEP 266

  Fly   191 -GLLIRNVQESDEGIYTCRAAVIETGELLERTIRVEVFIQPEIISLPTNLEAVEGKPFAANC--- 251
             ..::.:::.....::...|...|.|           :|...|:..|.::.  ||.|  .||   
Mouse   267 ISFVVTHLRPYTTYLFEVSAVTTEAG-----------YIDSTIVRTPESVP--EGPP--QNCITG 316

  Fly   252 TARGKPVPEISWIRDATQLNVATAD---RFQVNPQTGLVTISSVSQ-----------DDYGTYTC 302
            ...||.. .|||...|    :.|..   |.::...||.:..:|...           ..|..|..
Mouse   317 NVTGKAF-SISWDPPA----IVTGKFSYRVELYGPTGRILDNSTKDLRFVFTHLTPFTMYDVYVA 376

  Fly   303 LAKNRAGVVDQKTKLNVLVRPQ----IYELYNVTGARTKEIAITCRAKGRPAPAITFRRWGT--- 360
             |:..|| |..|:.|:|...|.    :::| .:......||.::.|...:|...|:..|...   
Mouse   377 -AETSAG-VGPKSNLSVFTPPDVPGAVFDL-QIVEVEATEIRVSWRKPRQPNGIISQYRVKVSVL 438

  Fly   361 -------------QEEYTNGQQDDDPRIILEP--NFDEERGESTGTLR-----ISNAE------- 398
                         |:||.|.....:...:::|  .|.|..||.:..|.     |.|:.       
Mouse   439 ESGVILENTLLTGQDEYINNPMTPEIMNLVDPMIGFYEGSGEMSSDLHSLASFIYNSHPHDFPAR 503

  Fly   399 -RSDDGLYQCI--ARNKGADAYKTGHIT------VEFAPD------FSHMKELPP----VFSWEQ 444
             |.:|.....:  .||:........|::      |.|...      |:.|.|.||    |.:.||
Mouse   504 TRVEDQRSPVVVATRNQYMTDIAAEHLSYVIRRLVPFTEHTISVSAFTVMGEGPPTVLTVRTREQ 568

  Fly   445 RKANLSCL-AMGIPNATIEWHW------NGRKIK--DLY----DTNLKIVGTGPRSDLIVHPVTR 496
            ..:::..: ...|.:::|..:|      || ||.  .:|    |||.....|...:..::..:.:
Mouse   569 VPSSIQIINYKNISSSSILLYWDPPEYPNG-KITHYTIYAMELDTNRAFQMTTVDNSFLITGLKK 632

  Fly   497 QYYSGYKC-IATNIHG-----TAEHDMQLKEARVPDFVSEAKPSQLTATTMTFDIRGPSTELGLP 555
              |:.||. :|.:.|.     :.|:|:.:   |.|:...|:.|..:..|.::     || ||.|.
Mouse   633 --YTRYKMRVAASTHVGESSLSEENDLFV---RTPEDEPESSPQDVKVTDVS-----PS-ELSLT 686

  Fly   556 ----------ILAYSVQYKEALNPDWSTAYNRSWSPDSPYIVEGLRPQTEYSFRFAARNQVGLGN 610
                      |:||.|.|:   |.|.....|.|   .:...:..|:|.|.|:....:..::|.||
Mouse   687 WSPPEKPNGIIIAYEVFYQ---NADALFVKNTS---TTNITLSDLKPYTLYNISIQSYTRLGHGN 745

  Fly   611 -----WGVNQQQSTPRRSAPEEPKPLHNPVQHDKEEPVVVSPYSDHFELRWGVPADNGEPIDRYQ 670
                 ..|...::.| .||||  ...:..:..::.|...:.|.|.:     |:       |.:|.
Mouse   746 QSSSLLSVRTSETVP-DSAPE--NITYKNISSEEIEIFFLPPRSPN-----GI-------IQKYT 795

  Fly   671 IKYCPGVKISGTWTELENSCNTVEVMETTSFEMTQLVGN----TYYRIELKAHNAIG---YSSPA 728
            |           :.:..|| :....:||||..:|  :|.    |:|.||:.|....|   .|.|.
Mouse   796 I-----------YLKRSNS-HEARTIETTSLTLT--IGGLKKYTHYVIEVSASTLKGEGVRSMPI 846

  Fly   729 SIIMKTTRGIDVIQVAERQVFSSAAIVGIAI----------GGVLL--LLFVVDLLCCITVHMGV 781
            ||:.:     :....:..|.||...:.|:.:          .|::|  .::|.|.:...|::   
Mouse   847 SILTE-----EDAPDSPPQNFSVKQLSGVTVMLSWQPPLEPNGIILYYTVYVWDKVSLKTIN--- 903

  Fly   782 MATMCRKAKRSPSEIDDEAKLGSLY---GWRFPLPYCSGQLVKEPPPSPLPLPPP-----VKLGG 838
             ||   :.....|::|..|.. |.|   ..||........::....|...|..||     |.|..
Mouse   904 -AT---EVSLELSDLDYHADY-SAYVTASTRFGDGKTRSSVINFRTPEGEPSDPPKDVHYVNLSS 963

  Fly   839 SPMS---TPLDEKEPLRTPTGSIK------QNSTIEFDGRF 870
            |.:.   ||     |:: |.|.|:      ||::..|...|
Mouse   964 SSIILFWTP-----PVK-PNGIIQYYSVYYQNTSSTFVQNF 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fas2NP_001284854.1 Ig 33..121 CDD:472250 7/42 (17%)
Ig strand B 50..54 CDD:409353
Ig strand C 66..70 CDD:409353
Ig strand E 99..103 CDD:409353 1/3 (33%)
Ig strand F 113..118 CDD:409353 1/7 (14%)
Ig 139..209 CDD:472250 13/87 (15%)
Ig strand B 156..159 CDD:409353 0/2 (0%)
Ig strand C 168..172 CDD:409353 1/3 (33%)
Ig strand E 190..194 CDD:409353 1/13 (8%)
Ig strand F 204..209 CDD:409353 0/4 (0%)
IgI_4_MYLK-like 229..319 CDD:409568 26/106 (25%)
Ig strand A 229..232 CDD:409568 0/2 (0%)
Ig strand A' 238..241 CDD:409568 0/2 (0%)
Ig strand B 246..254 CDD:409568 3/10 (30%)
Ig strand C 260..264 CDD:409568 2/3 (67%)
Ig strand C' 267..270 CDD:409568 1/2 (50%)
Ig strand D 277..281 CDD:409568 1/3 (33%)
Ig strand E 285..290 CDD:409568 1/4 (25%)
Ig strand F 298..306 CDD:409568 2/7 (29%)
Ig strand G 309..319 CDD:409568 4/9 (44%)
IG_like 330..424 CDD:214653 23/132 (17%)
Ig strand B 339..343 CDD:409353 1/3 (33%)
Ig strand C 352..356 CDD:409353 1/3 (33%)
Ig strand E 388..394 CDD:409353 1/10 (10%)
Ig strand F 404..409 CDD:409353 0/6 (0%)
Ig 447..515 CDD:409353 17/86 (20%)
Ig strand B 447..451 CDD:409353 0/3 (0%)
Ig strand C 460..464 CDD:409353 1/3 (33%)
Ig strand E 487..491 CDD:409353 0/3 (0%)
Ig strand F 501..506 CDD:409353 2/5 (40%)
FN3 525..619 CDD:238020 26/108 (24%)
FN3 640..735 CDD:238020 25/101 (25%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 76..>441 CDD:442628 65/326 (20%)
FN3 308..393 CDD:238020 24/93 (26%)
FN3 570..654 CDD:238020 17/86 (20%)
fn3 668..747 CDD:394996 23/90 (26%)
FN3 762..850 CDD:238020 29/115 (25%)
fn3 857..934 CDD:394996 18/84 (21%)
FN3 951..1049 CDD:238020 15/54 (28%)
FN3 1009..1626 CDD:442628
FN3 1645..1734 CDD:238020
UP_III_II 1759..1928 CDD:471435
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.

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