DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and SAMD1

DIOPT Version :10

Sequence 1:NP_572151.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_612361.1 Gene:SAMD1 / 90378 HGNCID:17958 Length:538 Species:Homo sapiens


Alignment Length:230 Identity:54/230 - (23%)
Similarity:70/230 - (30%) Gaps:77/230 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 KVQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQ-HPGSGALAAIPQTPTGASGSVPPPAG 143
            :||.|||         |.|.|          :.|.:|: .|.:.|.||.|.||      .|||..
Human    98 RVQPPRR---------GATPP----------APPRAPRGAPAAAAAAAPPPTP------APPPPP 137

  Fly   144 IPNSVAPPG-----------TPSSGGELVNGNN------LAA---------ALQKRINRKRKNHG 182
            .|.:.|.|.           .|.|.|....|..      |||         |:......:|....
Human   138 APVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPP 202

  Fly   183 GSAHGHHSL------TSQQQQSHPHPTTPQTPTATPVHVTGDGLISGAAND----------DGDG 231
            ..|.....|      .:..||..|.|..||.|..     .|.....|||..          .|.|
Human   203 AVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPE-----GGAVRAGGAARPVSLREVVRYLGGSG 262

  Fly   232 SQDGKTPTPRQSGSMVTHQDDVVTRMKNVEMIELG 266
            ...|:....|..|.:   :::...|.: :|...||
Human   263 GAGGRLTRGRVQGLL---EEEAAARGR-LERTRLG 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_572151.1 CBD_TIP60_like 27..90 CDD:350848 5/9 (56%)
PLN00104 <255..533 CDD:215056 4/12 (33%)
SAMD1NP_612361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..247 44/178 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..458 4/13 (31%)
SAM_Atherin-like 459..527 CDD:188982
Blue background indicates that the domain is not in the aligned region.

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