DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tip60 and kat5

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001072274.1 Gene:kat5 / 779727 XenbaseID:XB-GENE-5820892 Length:506 Species:Xenopus tropicalis


Alignment Length:556 Identity:318/556 - (57%)
Similarity:375/556 - (67%) Gaps:89/556 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 AALTEGCRLPVRMHKTD---DWPLAEIVSIKELDGRRQFYVHYVDFNKRLDEWVNEEDLYTRKVQ 82
            |.:.|||||||.....|   :||||||:|||||.|::.|||||:||||||||||..:.|..:|:|
 Frog     4 AEIVEGCRLPVLRKNQDNEVEWPLAEILSIKELTGKKLFYVHYIDFNKRLDEWVTHDRLDLKKIQ 68

  Fly    83 FPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPTSPQHPGSGALAAIPQTPTGASGSVPPPAGIPNS 147
            ||::: ::|.|..|         |.|  |||:||:.    .:..||:.       :|||      
 Frog    69 FPKKE-AKTPTKNG---------LPG--SRPSSPER----EVRKIPEL-------IPPP------ 104

  Fly   148 VAPPGTPSSGGELVNGNNLAAALQKRINRKRKNHGGSAHGHHSLTSQQQQSHPHPTTPQT---PT 209
            |.||.        ..|.:|...       |||         ..:.|......|.|.|.|.   |.
 Frog   105 VVPPA--------AGGKSLPVP-------KRK---------VDIVSPATPVPPPPETTQVTVFPQ 145

  Fly   210 ATPVHVTG----------DGLISG-----------------AANDDGDGSQDGKTPTPRQSGSMV 247
            ..|..|.|          :|.:..                 :|::|...|.||....||.:||:|
 Frog   146 QAPCDVAGVSAHTVMLSQNGAVRRPSAPAVQPGRKRKSNCLSADEDSQDSSDGIPSAPRMTGSLV 210

  Fly   248 THQ--DDVVTRMKNVEMIELGRHRIKPWYFSPYPQELCQMPCIYICEFCLKYRKSRKCLERHLSK 310
            :.:  ||::|||||:|.|||||||:||||||||||||..:|.:|:|||||||.||.|||:|||:|
 Frog   211 SDRSHDDIITRMKNIECIELGRHRLKPWYFSPYPQELTVLPVLYLCEFCLKYVKSLKCLQRHLTK 275

  Fly   311 CNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKLFLDHKTLYYDTDPFLFYVMTEFDSR 375
            ||||||||||||||.|||||||||||||.|:||||||||.|||||||||||||||||:|||:|.:
 Frog   276 CNLRHPPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYIMTEYDCK 340

  Fly   376 GFHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKFEGKTGSPEKPLSDLGLL 440
            |||||||||||||||||||||||||:|||||:|||||||||||||||.|||||:|||||||||||
 Frog   341 GFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL 405

  Fly   441 SYRSYWAQTILEIFISQNPSTDGEKPTITINDICECTSIKKEDVISTLQNLNLINYYKGQYIVCI 505
            ||||||:||||||.:.....| ||:|.||||:|.|.|||||||||||||.||||||||||||:.:
 Frog   406 SYRSYWSQTILEILMELKTET-GERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTL 469

  Fly   506 NRVIIEQHRRAMDKRKIRIDSKCLHWTPKDWSKRSK 541
            :..|:|.|.:||.||.:||||||||:||||||||.|
 Frog   470 SEDIVEGHEKAMQKRVLRIDSKCLHFTPKDWSKRGK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 36/57 (63%)
Drf_FH1 84..>157 CDD:283903 19/72 (26%)
PHA01732 139..>196 CDD:222828 12/56 (21%)
NAT_SF 254..533 CDD:302625 223/278 (80%)
MOZ_SAS 316..500 CDD:280097 156/183 (85%)
kat5NP_001072274.1 Tudor-knot 6..64 CDD:371690 36/57 (63%)
PLN00104 42..497 CDD:215056 288/508 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 326 1.000 Domainoid score I1189
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H100661
Inparanoid 1 1.050 595 1.000 Inparanoid score I960
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D285390at33208
OrthoFinder 1 1.000 - - FOG0004802
OrthoInspector 1 1.000 - - oto104530
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X828
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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