DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tip60 and kat6b

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_009305666.1 Gene:kat6b / 568932 ZFINID:ZDB-GENE-000607-52 Length:2044 Species:Danio rerio


Alignment Length:513 Identity:185/513 - (36%)
Similarity:262/513 - (51%) Gaps:100/513 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SQTGTSTGVTTPQRHHSLAGSVSRPTSPQHPGSGALAAIPQ------TPTGASGSVPPPAGIPNS 147
            :|:.:.:...:|   ||.:...|.|:....||:..|..:..      |..|.|..    .|:| |
Zfish   493 TQSSSPSSAHSP---HSSSSQSSGPSLSSLPGNSQLKGLFDGLSHIFTTQGQSRQ----KGLP-S 549

  Fly   148 VAPPGTPSSGGELVNGNNLAAALQ-----KRINRKRKNHGGSAHGHHSLTSQQQQSHPH------ 201
            .|||.......::.....::..||     |....|..:...||.|......:..:|..|      
Zfish   550 YAPPKRVRRTQDMSTSPKMSLQLQGKKPVKGFCSKLASLASSASGWPPKRGRPFKSALHFKRTPI 614

  Fly   202 ------------PTTPQTPTATPVHVTGDGLISGAANDDGDGSQDGKT-PTPR------------ 241
                        ..:||....||    |.|.::           ||:. |.|.            
Zfish   615 LRKHKLLGRFRFKASPQRENITP----GKGRLA-----------DGRVKPDPNHAFNVERCLRRE 664

  Fly   242 -QSGSMVTHQDDV-------------VTRMKN-------VEMIELGRHRIKPWYFSPYPQELCQM 285
             |.|.|....|.|             :|..||       ..:||.|::.|:.||.||||.|..::
Zfish   665 PQEGRMTLVNDHVAEEDLKLFRHVKELTAKKNGGDQGQSPPLIEFGKYEIQTWYSSPYPPEYLRL 729

  Fly   286 PCIYICEFCLKYRKSRKCLERHLSKCNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNLCLLAKL 350
            |.:|:|||||||.||:..|:||..||...|||.||||||..:|.||:||..:|::.|||||||||
Zfish   730 PKLYLCEFCLKYMKSQDILQRHSKKCGWFHPPANEIYRKDNLSVFEVDGNISKIFCQNLCLLAKL 794

  Fly   351 FLDHKTLYYDTDPFLFYVMTEFDSRGFHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIE 415
            ||||||||||.:||||||:|:.|.:|.|:||||||||...:.|||:||:.||.:||:|:|:.||:
Zfish   795 FLDHKTLYYDVEPFLFYVLTQNDEKGCHLVGYFSKEKLCQQKYNVSCIMIMPQFQRQGFGRFLID 859

  Fly   416 FSYELSKFEGKTGSPEKPLSDLGLLSYRSYWAQTILEIFISQNPSTDGEKPTITINDICECTSIK 480
            |||.||:.||:.|||||||||||.|||.:||...||| ::..:|.     .:::|..:...|.:.
Zfish   860 FSYLLSRLEGQAGSPEKPLSDLGRLSYLAYWKSVILE-YLHNHPD-----KSVSIRGMSRATGMC 918

  Fly   481 KEDVISTLQNLNLINYYKGQYIVCINRVIIEQHRRAMDKRKIR-----IDSKCLHWTP 533
            ..|:.:|||.||:|::..|::::.....:||:|   ||:.:::     :|..||.|||
Zfish   919 PHDIATTLQQLNMIDFQDGRFVIIQRHQLIEEH---MDRLRVKPRLHEVDPDCLSWTP 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553
Drf_FH1 84..>157 CDD:283903 18/73 (25%)
PHA01732 139..>196 CDD:222828 13/61 (21%)
NAT_SF 254..533 CDD:302625 141/290 (49%)
MOZ_SAS 316..500 CDD:280097 100/183 (55%)
kat6bXP_009305666.1 H15 113..167 CDD:197772
PHD_SF 212..270 CDD:304600
PHD2_KAT6A_6B 271..317 CDD:277002
NAT_SF 707..973 CDD:302625 138/274 (50%)
MOZ_SAS 760..937 CDD:280097 100/182 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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