DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tip60 and kat8

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001016234.2 Gene:kat8 / 548988 XenbaseID:XB-GENE-969438 Length:465 Species:Xenopus tropicalis


Alignment Length:518 Identity:191/518 - (36%)
Similarity:267/518 - (51%) Gaps:144/518 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 CRLPVRMHKTDD-WPLAEIVS--IKELDGRRQFYVHYVDFNKRLDEWVNEEDLYTRKVQFPRRDG 88
            ||      :.|: |..||::.  :.|.:||.::|||||..|:||||||::..|...|..   :|.
 Frog    70 CR------RADNTWHSAEVIQSRLNEQEGREEYYVHYVGCNRRLDEWVDKNRLALTKTV---KDA 125

  Fly    89 SQTGTSTGVTTPQRHHSLAGSVSRPTSPQHPGSGALAAIPQTPTGASGSVPPPAGIPNSVAPPGT 153
            .|..|...:                                                        
 Frog   126 VQKNTDQYL-------------------------------------------------------- 134

  Fly   154 PSSGGELVNGNNLAAALQKRI--NRKRK----NHGGSAHGHHSLTSQQQQSHPHPTTPQTPTATP 212
                      |.|:...:::|  |:|||    ||           .|:..:...|||        
 Frog   135 ----------NELSEQPERKITRNQKRKHDEINH-----------VQKTYAEMDPTT-------- 170

  Fly   213 VHVTGDGLISGAANDDGDGSQDGKTPTPRQSGSMVTHQDDVVTRMKNVEMIELGRHRIKPWYFSP 277
                                            :.:..:.:.:|::|.|:.|.:|.:.|..|||||
 Frog   171 --------------------------------AALEKEHEAITKIKYVDKIHIGNYEIDAWYFSP 203

  Fly   278 YPQELCQMPCIYICEFCLKYRKSRKCLERHLSKCNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQ 342
            :|::..:.|.:::||:||||.|..|....||..|..|.|||.|||||..||.:|:||:.:|:|.|
 Frog   204 FPEDYGKQPKLWVCEYCLKYMKFEKSYRYHLGLCQWRQPPGKEIYRKGNISVYEVDGKDHKIYCQ 268

  Fly   343 NLCLLAKLFLDHKTLYYDTDPFLFYVMTEFDSRGFHIVGYFSKEKESTEDYNVACILTMPPYQRK 407
            ||||||||||||||||:|.:||:||::||.|.:|.||||||||||||.:..|||||||:|||||:
 Frog   269 NLCLLAKLFLDHKTLYFDVEPFVFYILTEVDRQGAHIVGYFSKEKESPDGNNVACILTLPPYQRR 333

  Fly   408 GYGKLLIEFSYELSKFEGKTGSPEKPLSDLGLLSYRSYWAQTILEIFISQNPSTDGEKPTITIND 472
            ||||.||.|||||||.|...|||||||||||.|||||||:..:|||.       ...:.|::|.|
 Frog   334 GYGKFLIAFSYELSKLENTVGSPEKPLSDLGKLSYRSYWSWVLLEIL-------RDFRGTLSIKD 391

  Fly   473 ICECTSIKKEDVISTLQNLNLINYYKGQYIVCINRVIIEQHRRAMDKRK--IRIDSKCLHWTP 533
            :.:.|||.:.|:|.|||:||::.|:|||:::|:...::|:|.::...:|  |.:||..|.|.|
 Frog   392 LSQMTSITQNDIIGTLQSLNMVKYWKGQHVICVTPKLVEEHLKSAQYKKPPITVDSINLKWAP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 22/53 (42%)
Drf_FH1 84..>157 CDD:283903 3/72 (4%)
PHA01732 139..>196 CDD:222828 10/62 (16%)
NAT_SF 254..533 CDD:302625 151/280 (54%)
MOZ_SAS 316..500 CDD:280097 115/183 (63%)
kat8NP_001016234.2 PLN00104 63..456 CDD:215056 191/518 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D285390at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R415
SonicParanoid 1 1.000 - - X828
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.040

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