DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tip60 and Kat6b

DIOPT Version :9

Sequence 1:NP_001259234.1 Gene:Tip60 / 31362 FlyBaseID:FBgn0026080 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_006519326.1 Gene:Kat6b / 54169 MGIID:1858746 Length:2054 Species:Mus musculus


Alignment Length:584 Identity:199/584 - (34%)
Similarity:279/584 - (47%) Gaps:130/584 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LDGRRQFYVHYVDFNKRLDEWVNEEDLYTRKVQFPRRDGSQTGTSTGVTTPQRHHSLAGSVSRPT 114
            :||..:|:....|..:...|.::....|.     ||:..||..:.|.       |.||...::..
Mouse   436 IDGLTKFFTPSPDGRRSRGEIIDFSKHYR-----PRKKVSQKQSCTS-------HVLATGTTQKL 488

  Fly   115 SPQHPGSGALAAIPQTP-TGASGSVPPPAGIPNSVAPPGTPSSGGE-----LVNGNNLAA----- 168
            .|     ...|.:|..| :|.|.|....:...:|.:...:.|..||     |.|.:.|.|     
Mouse   489 KP-----APSALLPPAPISGQSPSSQKSSSSTSSTSTQSSSSQSGEPSFSSLTNNSQLKALFDGL 548

  Fly   169 ------------------ALQKRINRKRK----------------------NHG----GSAHGH- 188
                              |..||:.||.:                      :|.    |...|| 
Mouse   549 SHIYTTQGQSRKKGHPSYAPPKRMRRKTEFSSTAKAKARFFGKRDFRSRLLSHSSCSWGMTRGHI 613

  Fly   189 -----HSLTSQQQQSH------PHPTTPQTPTATPVHVTGDG-LISGAANDDGDGSQDGKTPTPR 241
                 |...:...:.|      .:..|||..|.:    :|.| |..|..|.|.|...|.|....:
Mouse   614 FKAIAHFKRTTFLKKHRMLGRLKYKVTPQMGTPS----SGKGSLADGRINPDQDNDTDIKISIKQ 674

  Fly   242 QSG--------SMVTHQD-DVVTRMKNV------------------EMIELGRHRIKPWYFSPYP 279
            :|.        .:||.:| ||..:.:.:                  .:||.|::.|:.||.||||
Mouse   675 ESADVSLVGNKELVTEEDLDVFKQAQELSWEKIECESGVEDCGRYPSVIEFGKYEIQTWYSSPYP 739

  Fly   280 QELCQMPCIYICEFCLKYRKSRKCLERHLSKCNLRHPPGNEIYRKHTISFFEIDGRKNKVYAQNL 344
            ||..::|.:|:|||||||.||:..|.||..||...|||.|||||:..:|.||:||..:|:|.|||
Mouse   740 QEYARLPKLYLCEFCLKYMKSKNILLRHSKKCGWFHPPANEIYRRKDLSVFEVDGNMSKIYCQNL 804

  Fly   345 CLLAKLFLDHKTLYYDTDPFLFYVMTEFDSRGFHIVGYFSKEKESTEDYNVACILTMPPYQRKGY 409
            ||||||||||||||||.:||||||:|:.|.:|.|:||||||||...:.|||:||:.||.:||:|:
Mouse   805 CLLAKLFLDHKTLYYDVEPFLFYVLTKNDEKGCHLVGYFSKEKLCQQKYNVSCIMIMPQHQRQGF 869

  Fly   410 GKLLIEFSYELSKFEGKTGSPEKPLSDLGLLSYRSYWAQTILEIFISQNPSTDGEKPTITINDIC 474
            |:.||:|||.||:.||:.|||||||||||.|||.:||...|||.....:      :..|:|..|.
Mouse   870 GRFLIDFSYLLSRREGQAGSPEKPLSDLGRLSYLAYWKSVILEYLYRHH------ERHISIKAIS 928

  Fly   475 ECTSIKKEDVISTLQNLNLINYYKGQYIVCINRVIIEQHRRAMDK-----RKIRIDSKCLHWTP 533
            ..|.:...|:.:|||:|::|:...|::::.....:|..|   |:|     |...:|.:.|.|||
Mouse   929 RATGMCPHDIATTLQHLHMIDRRDGRFVIIRREKLILGH---MEKLKNCSRPNELDPESLRWTP 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tip60NP_001259234.1 Tudor-knot 23..78 CDD:288553 5/27 (19%)
Drf_FH1 84..>157 CDD:283903 17/73 (23%)
PHA01732 139..>196 CDD:222828 18/116 (16%)
NAT_SF 254..533 CDD:302625 138/301 (46%)
MOZ_SAS 316..500 CDD:280097 100/183 (55%)
Kat6bXP_006519326.1 H15 94..168 CDD:197772
PHD1_MOZ_MORF 213..270 CDD:277090
PHD2_KAT6A_6B 272..318 CDD:277002
PLN00104 <721..989 CDD:215056 138/276 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5027
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D629545at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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